Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 RN7SL277P-201ENST00000481521 288 ntBASIC13.55□□□□□ -0.24
SKP1P63208 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.55□□□□□ -0.24
SKP1P63208 MIR6769A-201ENST00000617340 73 ntBASIC13.55□□□□□ -0.24
SKP1P63208 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.55□□□□□ -0.24
SKP1P63208 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SKP1P63208 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SKP1P63208 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.55□□□□□ -0.24
SKP1P63208 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.55□□□□□ -0.24
SKP1P63208 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.55□□□□□ -0.24
SKP1P63208 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SKP1P63208 SHMT1P1-201ENST00000419974 1312 ntBASIC13.55□□□□□ -0.24
SKP1P63208 KRT18P9-201ENST00000604826 1300 ntBASIC13.55□□□□□ -0.24
SKP1P63208 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 GRK6P1-201ENST00000400595 1711 ntBASIC13.55□□□□□ -0.24
SKP1P63208 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SKP1P63208 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SKP1P63208 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SKP1P63208 AC012617.1-204ENST00000586340 2305 ntBASIC13.55□□□□□ -0.24
SKP1P63208 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SKP1P63208 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.54□□□□□ -0.24
SKP1P63208 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SKP1P63208 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SKP1P63208 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SKP1P63208 AC006987.1-201ENST00000413610 527 ntBASIC13.54□□□□□ -0.24
SKP1P63208 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.54□□□□□ -0.24
SKP1P63208 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.54□□□□□ -0.24
SKP1P63208 RN7SL258P-201ENST00000478664 300 ntBASIC13.54□□□□□ -0.24
SKP1P63208 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.54□□□□□ -0.24
SKP1P63208 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 ACTG1P17-201ENST00000558391 1119 ntBASIC13.54□□□□□ -0.24
SKP1P63208 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 MIR3619-201ENST00000579667 83 ntBASIC13.54□□□□□ -0.24
SKP1P63208 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
SKP1P63208 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.54□□□□□ -0.24
SKP1P63208 AC138627.1-207ENST00000641560 1006 ntBASIC13.54□□□□□ -0.24
SKP1P63208 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
SKP1P63208 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SKP1P63208 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.54□□□□□ -0.24
SKP1P63208 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SKP1P63208 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SKP1P63208 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 AC016397.2-201ENST00000624848 1985 ntBASIC13.53□□□□□ -0.24
SKP1P63208 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SKP1P63208 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.53□□□□□ -0.24
SKP1P63208 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SKP1P63208 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SKP1P63208 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms