Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S1P61966 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
AP1S1P61966 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S1P61966 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
AP1S1P61966 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
AP1S1P61966 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.27□□□□□ -0.12
AP1S1P61966 AL591122.2-201ENST00000624125 1853 ntBASIC14.27□□□□□ -0.12
AP1S1P61966 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
AP1S1P61966 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
AP1S1P61966 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S1P61966 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
AP1S1P61966 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
AP1S1P61966 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
AP1S1P61966 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.27□□□□□ -0.12
AP1S1P61966 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
AP1S1P61966 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 LINC00265-2P-201ENST00000413372 782 ntBASIC14.27□□□□□ -0.13
AP1S1P61966 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.27□□□□□ -0.13
AP1S1P61966 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 AL592076.1-201ENST00000424448 303 ntBASIC14.27□□□□□ -0.13
AP1S1P61966 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.27□□□□□ -0.13
AP1S1P61966 TMEM198B-204ENST00000484016 896 ntBASIC14.27□□□□□ -0.13
AP1S1P61966 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.27□□□□□ -0.13
AP1S1P61966 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.27□□□□□ -0.13
AP1S1P61966 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.27□□□□□ -0.13
AP1S1P61966 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.27□□□□□ -0.13
AP1S1P61966 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 SIGLEC18P-201ENST00000602271 909 ntBASIC14.27□□□□□ -0.13
AP1S1P61966 AC106872.11-201ENST00000605838 421 ntBASIC14.27□□□□□ -0.13
AP1S1P61966 AC009560.1-201ENST00000620208 434 ntBASIC14.27□□□□□ -0.13
AP1S1P61966 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.27□□□□□ -0.13
AP1S1P61966 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
AP1S1P61966 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
AP1S1P61966 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S1P61966 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S1P61966 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
AP1S1P61966 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.26□□□□□ -0.13
AP1S1P61966 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 AC004554.1-201ENST00000422830 1468 ntBASIC14.26□□□□□ -0.13
AP1S1P61966 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.26□□□□□ -0.13
AP1S1P61966 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.26□□□□□ -0.13
AP1S1P61966 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.26□□□□□ -0.13
AP1S1P61966 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.26□□□□□ -0.13
AP1S1P61966 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
AP1S1P61966 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
AP1S1P61966 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.26□□□□□ -0.13
AP1S1P61966 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S1P61966 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.26□□□□□ -0.13
AP1S1P61966 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.26□□□□□ -0.13
AP1S1P61966 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.26□□□□□ -0.13
AP1S1P61966 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms