Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDN6P56747 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN6P56747 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 LINC00115-201ENST00000473798 1317 ntBASIC13.62□□□□□ -0.23
CLDN6P56747 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN6P56747 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 FUCA1P1-201ENST00000374476 1351 ntBASIC13.61□□□□□ -0.23
CLDN6P56747 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.61□□□□□ -0.23
CLDN6P56747 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN6P56747 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.61□□□□□ -0.23
CLDN6P56747 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 EEF1GP8-201ENST00000506566 1154 ntBASIC13.61□□□□□ -0.23
CLDN6P56747 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 AC145285.5-201ENST00000562217 361 ntBASIC13.61□□□□□ -0.23
CLDN6P56747 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN6P56747 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 MIR6746-201ENST00000620971 63 ntBASIC13.61□□□□□ -0.23
CLDN6P56747 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CLDN6P56747 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN6P56747 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CLDN6P56747 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN6P56747 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN6P56747 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN6P56747 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN6P56747 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CLDN6P56747 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN6P56747 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms