Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH6P55285 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH6P55285 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDH6P55285 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH6P55285 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.83□□□□□ -0.03
CDH6P55285 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH6P55285 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH6P55285 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CDH6P55285 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.83□□□□□ -0.03
CDH6P55285 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH6P55285 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH6P55285 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH6P55285 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.83□□□□□ -0.03
CDH6P55285 AC105206.1-202ENST00000314927 2368 ntBASIC14.83□□□□□ -0.03
CDH6P55285 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH6P55285 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 AC018735.1-201ENST00000437208 1502 ntBASIC14.83□□□□□ -0.04
CDH6P55285 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH6P55285 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 AC103592.1-201ENST00000394513 664 ntBASIC14.83□□□□□ -0.04
CDH6P55285 BRWD1P1-201ENST00000401091 371 ntBASIC14.83□□□□□ -0.04
CDH6P55285 AK2P2-201ENST00000439142 405 ntBASIC14.83□□□□□ -0.04
CDH6P55285 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.83□□□□□ -0.04
CDH6P55285 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH6P55285 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.83□□□□□ -0.04
CDH6P55285 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.83□□□□□ -0.04
CDH6P55285 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH6P55285 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CDH6P55285 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH6P55285 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 AL590824.1-201ENST00000403828 1349 ntBASIC14.83□□□□□ -0.04
CDH6P55285 LINC00115-201ENST00000473798 1317 ntBASIC14.83□□□□□ -0.04
CDH6P55285 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDH6P55285 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDH6P55285 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH6P55285 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH6P55285 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH6P55285 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.82□□□□□ -0.04
CDH6P55285 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH6P55285 AC078875.1-201ENST00000431907 724 ntBASIC14.82□□□□□ -0.04
CDH6P55285 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH6P55285 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 PFN1P12-201ENST00000455938 534 ntBASIC14.82□□□□□ -0.04
CDH6P55285 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 AC106794.1-201ENST00000506935 792 ntBASIC14.82□□□□□ -0.04
CDH6P55285 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH6P55285 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.82□□□□□ -0.04
CDH6P55285 SNORD3B-2-202ENST00000571722 791 ntBASIC14.82□□□□□ -0.04
CDH6P55285 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDH6P55285 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH6P55285 AL136295.7-201ENST00000619226 1200 ntBASIC14.82□□□□□ -0.04
CDH6P55285 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.82□□□□□ -0.04
CDH6P55285 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH6P55285 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH6P55285 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH6P55285 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH6P55285 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH6P55285 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH6P55285 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms