Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.58■□□□□ 0.08
CPT1AP50416 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CPT1AP50416 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.58■□□□□ 0.08
CPT1AP50416 HLA-DPA2-205ENST00000433582 733 ntBASIC15.58■□□□□ 0.08
CPT1AP50416 EEF1DP2-201ENST00000433698 843 ntBASIC15.58■□□□□ 0.08
CPT1AP50416 FAM86KP-201ENST00000509817 987 ntBASIC15.58■□□□□ 0.08
CPT1AP50416 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.58■□□□□ 0.08
CPT1AP50416 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.58■□□□□ 0.08
CPT1AP50416 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 BAK1P2-201ENST00000532665 631 ntBASIC15.58■□□□□ 0.08
CPT1AP50416 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.58■□□□□ 0.08
CPT1AP50416 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.58■□□□□ 0.08
CPT1AP50416 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.58■□□□□ 0.08
CPT1AP50416 AL136982.5-201ENST00000605222 294 ntBASIC15.58■□□□□ 0.08
CPT1AP50416 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CPT1AP50416 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.58■□□□□ 0.08
CPT1AP50416 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 FKBP4P8-201ENST00000610931 1369 ntBASIC15.58■□□□□ 0.08
CPT1AP50416 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CPT1AP50416 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.58■□□□□ 0.08
CPT1AP50416 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CPT1AP50416 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CPT1AP50416 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.57■□□□□ 0.08
CPT1AP50416 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.57■□□□□ 0.08
CPT1AP50416 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.57■□□□□ 0.08
CPT1AP50416 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CPT1AP50416 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.57■□□□□ 0.08
CPT1AP50416 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CPT1AP50416 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.57■□□□□ 0.08
CPT1AP50416 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.57■□□□□ 0.08
CPT1AP50416 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CPT1AP50416 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CPT1AP50416 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CPT1AP50416 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.57■□□□□ 0.08
CPT1AP50416 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC15.57■□□□□ 0.08
CPT1AP50416 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.57■□□□□ 0.08
CPT1AP50416 AC083801.1-201ENST00000491689 358 ntBASIC15.57■□□□□ 0.08
CPT1AP50416 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.57■□□□□ 0.08
CPT1AP50416 AC106047.2-201ENST00000511723 743 ntBASIC15.57■□□□□ 0.08
CPT1AP50416 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.57■□□□□ 0.08
CPT1AP50416 TYMSP2-201ENST00000589501 424 ntBASIC15.57■□□□□ 0.08
CPT1AP50416 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.57■□□□□ 0.08
CPT1AP50416 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.57■□□□□ 0.08
CPT1AP50416 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CPT1AP50416 AC015909.5-201ENST00000624336 2266 ntBASIC15.57■□□□□ 0.08
CPT1AP50416 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPT1AP50416 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPT1AP50416 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPT1AP50416 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CPT1AP50416 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPT1AP50416 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPT1AP50416 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.56■□□□□ 0.08
CPT1AP50416 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPT1AP50416 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPT1AP50416 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPT1AP50416 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.56■□□□□ 0.08
CPT1AP50416 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPT1AP50416 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPT1AP50416 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPT1AP50416 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPT1AP50416 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms