Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
TRIOO75962 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRIOO75962 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRIOO75962 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIOO75962 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIOO75962 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRIOO75962 RN7SL677P-201ENST00000466970 319 ntBASIC13.95□□□□□ -0.18
TRIOO75962 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.95□□□□□ -0.18
TRIOO75962 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIOO75962 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIOO75962 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRIOO75962 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRIOO75962 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIOO75962 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC13.95□□□□□ -0.18
TRIOO75962 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC13.95□□□□□ -0.18
TRIOO75962 AL137077.1-201ENST00000442115 528 ntBASIC13.95□□□□□ -0.18
TRIOO75962 RN7SL2-201ENST00000490232 300 ntBASIC13.95□□□□□ -0.18
TRIOO75962 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC13.95□□□□□ -0.18
TRIOO75962 RN7SL4P-201ENST00000584058 295 ntBASIC13.95□□□□□ -0.18
TRIOO75962 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRIOO75962 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC13.95□□□□□ -0.18
TRIOO75962 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRIOO75962 AP000437.1-201ENST00000624057 2085 ntBASIC13.95□□□□□ -0.18
TRIOO75962 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIOO75962 AC104581.4-201ENST00000623126 3052 ntBASIC13.94□□□□□ -0.18
TRIOO75962 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRIOO75962 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIOO75962 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRIOO75962 AC138392.1-201ENST00000427577 921 ntBASIC13.94□□□□□ -0.18
TRIOO75962 Z84721.1-201ENST00000438841 372 ntBASIC13.94□□□□□ -0.18
TRIOO75962 AL512310.5-201ENST00000551999 515 ntBASIC13.94□□□□□ -0.18
TRIOO75962 MIR4459-201ENST00000581837 66 ntBASIC13.94□□□□□ -0.18
TRIOO75962 MIR4309-201ENST00000582498 83 ntBASIC13.94□□□□□ -0.18
TRIOO75962 AL137028.2-201ENST00000614601 256 ntBASIC13.94□□□□□ -0.18
TRIOO75962 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIOO75962 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIOO75962 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRIOO75962 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIOO75962 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRIOO75962 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIOO75962 POLR3DP1-201ENST00000398689 1176 ntBASIC13.94□□□□□ -0.18
TRIOO75962 RN7SL487P-201ENST00000468140 344 ntBASIC13.94□□□□□ -0.18
TRIOO75962 FAM213AP2-201ENST00000521579 683 ntBASIC13.94□□□□□ -0.18
TRIOO75962 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.94□□□□□ -0.18
TRIOO75962 MIR7704-201ENST00000610524 59 ntBASIC13.94□□□□□ -0.18
TRIOO75962 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIOO75962 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
TRIOO75962 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRIOO75962 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13.94□□□□□ -0.18
TRIOO75962 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.94□□□□□ -0.18
TRIOO75962 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 KRT127P-201ENST00000547183 433 ntBASIC13.94□□□□□ -0.18
TRIOO75962 AC091691.1-201ENST00000583587 1018 ntBASIC13.94□□□□□ -0.18
TRIOO75962 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIOO75962 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIOO75962 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIOO75962 AC022532.1-201ENST00000624563 1728 ntBASIC13.94□□□□□ -0.18
TRIOO75962 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRIOO75962 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIOO75962 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIOO75962 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIOO75962 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIOO75962 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIOO75962 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIOO75962 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIOO75962 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIOO75962 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms