Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 MIR6074-201ENST00000612054 107 ntBASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 AC139712.1-201ENST00000378256 1875 ntBASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 RN7SL832P-201ENST00000607781 1756 ntBASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA1Q9UND3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 AC090505.1-201ENST00000430515 1834 ntBASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 AL592076.1-201ENST00000424448 303 ntBASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 TSPY25P-201ENST00000429463 745 ntBASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 XBP1P1-201ENST00000436573 652 ntBASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 IQSEC3P1-201ENST00000538799 536 ntBASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 AC103810.10-201ENST00000606504 343 ntBASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 AL805961.1-201ENST00000642026 753 ntBASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA1Q9UND3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA1Q9UND3 AC215219.1-201ENST00000400706 1817 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms