Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP2Q9UDT6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP2Q9UDT6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP2Q9UDT6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP2Q9UDT6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP2Q9UDT6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP2Q9UDT6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLIP2Q9UDT6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 PRKXP1-201ENST00000561423 1122 ntBASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 PHBP15-201ENST00000574228 665 ntBASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 AL591471.1-201ENST00000621855 229 ntBASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 AL353726.2-201ENST00000623259 884 ntBASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLIP2Q9UDT6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 FAM90A2P-201ENST00000511144 1395 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 FAM90A25P-201ENST00000528404 1395 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 AC087386.2-201ENST00000623212 4637 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 BANF1P3-201ENST00000412556 261 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 AC092580.1-201ENST00000433998 658 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 AL161932.2-201ENST00000435436 679 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 MAGEA5-201ENST00000446757 942 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 RN7SL530P-201ENST00000485097 298 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 RN7SL67P-201ENST00000492147 296 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 AC021016.3-201ENST00000608367 477 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 AL359183.1-201ENST00000623796 2132 ntBASIC16.91■□□□□ 0.3
CLIP2Q9UDT6 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms