Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 SHC1P1-201ENST00000425230 1745 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 AL138725.1-201ENST00000407347 1314 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 AC012508.2-201ENST00000567613 1472 ntBASIC15.1■□□□□ 0.01
CD248Q9HCU0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 AC021723.1-201ENST00000486306 515 ntBASIC15.1■□□□□ 0.01
CD248Q9HCU0 RN7SL720P-201ENST00000488178 304 ntBASIC15.1■□□□□ 0.01
CD248Q9HCU0 AC024681.1-201ENST00000521917 487 ntBASIC15.1■□□□□ 0.01
CD248Q9HCU0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 AC100757.4-201ENST00000626934 759 ntBASIC15.1■□□□□ 0.01
CD248Q9HCU0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.1■□□□□ 0.01
CD248Q9HCU0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD248Q9HCU0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 E2F3P2-201ENST00000447755 1422 ntBASIC15.09■□□□□ 0.01
CD248Q9HCU0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.09■□□□□ 0.01
CD248Q9HCU0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 DUX4L46-201ENST00000566845 751 ntBASIC15.09■□□□□ 0.01
CD248Q9HCU0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 RN7SL163P-201ENST00000583100 276 ntBASIC15.09■□□□□ 0.01
CD248Q9HCU0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 CU633904.3-201ENST00000624042 1029 ntBASIC15.09■□□□□ 0.01
CD248Q9HCU0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms