Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CICP12-201ENST00000455801 843 ntBASIC13.53□□□□□ -0.24
TM9SF4Q92544 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 AC022447.6-201ENST00000515522 438 ntBASIC13.53□□□□□ -0.24
TM9SF4Q92544 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 AC103810.10-201ENST00000606504 343 ntBASIC13.53□□□□□ -0.24
TM9SF4Q92544 U62317.3-201ENST00000608319 855 ntBASIC13.53□□□□□ -0.24
TM9SF4Q92544 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 FRMPD2B-201ENST00000431305 1347 ntBASIC13.53□□□□□ -0.24
TM9SF4Q92544 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TM9SF4Q92544 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.53□□□□□ -0.24
TM9SF4Q92544 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TM9SF4Q92544 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TM9SF4Q92544 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TM9SF4Q92544 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TM9SF4Q92544 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.52□□□□□ -0.24
TM9SF4Q92544 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TM9SF4Q92544 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TM9SF4Q92544 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
TM9SF4Q92544 AC027612.1-201ENST00000445234 2395 ntBASIC13.52□□□□□ -0.24
TM9SF4Q92544 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.52□□□□□ -0.24
TM9SF4Q92544 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.52□□□□□ -0.24
TM9SF4Q92544 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 AL157407.1-201ENST00000435784 904 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 AC098935.1-201ENST00000446057 611 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 KLF2P1-201ENST00000447438 1042 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 AC073150.1-201ENST00000450406 1084 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 GCOM2-201ENST00000509133 1104 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms