Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.13■□□□□ 0.01
LMO3Q8TAP4 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LMO3Q8TAP4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 AC020907.1-201ENST00000616460 1350 ntBASIC15.12■□□□□ 0.01
LMO3Q8TAP4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 KRT8P31-201ENST00000504812 1408 ntBASIC15.12■□□□□ 0.01
LMO3Q8TAP4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 AL445250.1-201ENST00000641671 2259 ntBASIC15.12■□□□□ 0.01
LMO3Q8TAP4 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 SLC25A15P3-201ENST00000505530 290 ntBASIC15.12■□□□□ 0.01
LMO3Q8TAP4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 AL133467.4-201ENST00000602953 725 ntBASIC15.12■□□□□ 0.01
LMO3Q8TAP4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 MIR6769A-201ENST00000617340 73 ntBASIC15.12■□□□□ 0.01
LMO3Q8TAP4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LMO3Q8TAP4 MARK2P16-201ENST00000605714 1723 ntBASIC15.12■□□□□ 0.01
LMO3Q8TAP4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMO3Q8TAP4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMO3Q8TAP4 AC008132.1-202ENST00000342005 1389 ntBASIC15.11■□□□□ 0.01
LMO3Q8TAP4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMO3Q8TAP4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMO3Q8TAP4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms