Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.21□□□□□ -0.3
TMEM53Q6P2H8 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 LSINCT5-201ENST00000626215 2647 ntBASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 EIF3FP3-201ENST00000434851 1086 ntBASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 BTNL10-201ENST00000595971 695 ntBASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 RPSAP52-203ENST00000622976 1023 ntBASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM53Q6P2H8 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 BCRP2-202ENST00000447763 634 ntBASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 BCRP6-201ENST00000510112 632 ntBASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 BCRP7-201ENST00000511549 544 ntBASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms