Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 EPB41L2-232ENST00000628542 4247 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
LINC01554Q52M75 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
LINC01554Q52M75 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01554Q52M75 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01554Q52M75 PMS2P7-201ENST00000506558 1336 ntBASIC7.24□□□□□ -1.25
LINC01554Q52M75 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01554Q52M75 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01554Q52M75 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01554Q52M75 PHF8-201ENST00000322659 2921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
LINC01554Q52M75 VPS18-201ENST00000220509 3895 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 MPP2-201ENST00000269095 4414 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01554Q52M75 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 AC090616.6-203ENST00000579186 1945 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 AC105250.1-201ENST00000509378 2057 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 BCO1-201ENST00000258168 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 HMGA1P7-201ENST00000406908 502 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 FAM197Y8-203ENST00000450145 560 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 AC108751.1-201ENST00000490852 363 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 IGHV3-65-201ENST00000523210 341 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 AF238378.1-201ENST00000526806 358 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 MMP17-203ENST00000535004 719 ntTSL 3 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 IFNL4P1-201ENST00000607083 540 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 AC008735.5-201ENST00000623544 497 ntBASIC7.23□□□□□ -1.25
LINC01554Q52M75 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 GRPEL1-201ENST00000264954 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01554Q52M75 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
LINC01554Q52M75 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms