Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AC091691.1-201ENST00000583587 1018 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 IFNL3P1-201ENST00000595082 501 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AC026336.4-201ENST00000624565 1050 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AC022532.1-201ENST00000624563 1728 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AC068587.6-202ENST00000641839 5619 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 MIR1226-201ENST00000408658 75 ntBASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AC007881.1-201ENST00000437460 187 ntBASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 RN7SL523P-201ENST00000484401 298 ntBASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 MIR5193-201ENST00000584510 109 ntBASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AC113385.2-201ENST00000614465 762 ntBASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AC106782.5-201ENST00000616011 337 ntBASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO4Q2I0M5 NFIC-211ENST00000641145 8399 ntBASIC13.65□□□□□ -0.23
RSPO4Q2I0M5 AC106785.2-201ENST00000564385 1319 ntBASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 TMBIM7P-203ENST00000641617 1718 ntBASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 AC006486.2-201ENST00000624246 2199 ntBASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms