Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC215219.1-201ENST00000400706 1817 ntBASIC10.1□□□□□ -0.79
CKS1BP61024 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.1□□□□□ -0.79
CKS1BP61024 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC10.1□□□□□ -0.79
CKS1BP61024 SDHAP3-202ENST00000515467 728 ntBASIC10.1□□□□□ -0.79
CKS1BP61024 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
CKS1BP61024 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.1□□□□□ -0.79
CKS1BP61024 MIR4469-201ENST00000583919 79 ntBASIC10.1□□□□□ -0.79
CKS1BP61024 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.1□□□□□ -0.79
CKS1BP61024 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.1□□□□□ -0.79
CKS1BP61024 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.1□□□□□ -0.79
CKS1BP61024 AC009093.7-201ENST00000623853 1223 ntBASIC10.1□□□□□ -0.79
CKS1BP61024 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.1□□□□□ -0.79
CKS1BP61024 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 MXRA5Y-201ENST00000420610 8000 ntBASIC10.1□□□□□ -0.79
CKS1BP61024 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
CKS1BP61024 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
CKS1BP61024 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CKS1BP61024 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10.09□□□□□ -0.79
CKS1BP61024 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CKS1BP61024 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.09□□□□□ -0.79
CKS1BP61024 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
CKS1BP61024 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.09□□□□□ -0.79
CKS1BP61024 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC10.09□□□□□ -0.79
CKS1BP61024 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CKS1BP61024 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
CKS1BP61024 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
CKS1BP61024 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CKS1BP61024 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CKS1BP61024 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
CKS1BP61024 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.09□□□□□ -0.79
CKS1BP61024 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.09□□□□□ -0.79
CKS1BP61024 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
CKS1BP61024 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CKS1BP61024 AL080243.2-201ENST00000418783 582 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms