RNA–Protein interactions for RNA: ENST00000340802.10

PFKM-202, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2 BASIC

Gene PFKM, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-202ENST00000340802 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
PFKM-202ENST00000340802 PELP1Q8IZL8 1130 aaKnown RBP20.07■□□□□ 0.8
PFKM-202ENST00000340802 MYT1Q01538 1121 aa19.63■□□□□ 0.73
PFKM-202ENST00000340802 PRKCSHP14314 528 aaPredicted RBP19.3■□□□□ 0.68
PFKM-202ENST00000340802 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
PFKM-202ENST00000340802 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.6
PFKM-202ENST00000340802 BCL11AQ9H165 835 aa18.73■□□□□ 0.59
PFKM-202ENST00000340802 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
PFKM-202ENST00000340802 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
PFKM-202ENST00000340802 HRCP23327 699 aa18.65■□□□□ 0.58
PFKM-202ENST00000340802 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.57
PFKM-202ENST00000340802 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
PFKM-202ENST00000340802 ERICH6Q7L0X2 663 aa18.41■□□□□ 0.54
PFKM-202ENST00000340802 APLP2Q06481 763 aa18.36■□□□□ 0.53
PFKM-202ENST00000340802 ABCC9O60706 1549 aa18.36■□□□□ 0.53
PFKM-202ENST00000340802 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.45
PFKM-202ENST00000340802 CENPBP07199 599 aaPredicted RBP17.87■□□□□ 0.45
PFKM-202ENST00000340802 GTF3C3Q9Y5Q9 886 aa17.79■□□□□ 0.44
PFKM-202ENST00000340802 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
PFKM-202ENST00000340802 NACADO15069 1562 aa17.72■□□□□ 0.43
PFKM-202ENST00000340802 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
PFKM-202ENST00000340802 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
PFKM-202ENST00000340802 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
PFKM-202ENST00000340802 MYO15BQ96JP2 1530 aa17.64■□□□□ 0.41
PFKM-202ENST00000340802 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
PFKM-202ENST00000340802 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
PFKM-202ENST00000340802 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
PFKM-202ENST00000340802 ANP32EQ9BTT0 268 aa17.49■□□□□ 0.39
PFKM-202ENST00000340802 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
PFKM-202ENST00000340802 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
PFKM-202ENST00000340802 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
PFKM-202ENST00000340802 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
PFKM-202ENST00000340802 CCDC136Q96JN2 1154 aa17.29■□□□□ 0.36
PFKM-202ENST00000340802 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
PFKM-202ENST00000340802 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
PFKM-202ENST00000340802 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
PFKM-202ENST00000340802 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
PFKM-202ENST00000340802 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
PFKM-202ENST00000340802 UBE2Q2Q8WVN8 375 aa17.08■□□□□ 0.32
PFKM-202ENST00000340802 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
PFKM-202ENST00000340802 PKNOX2Q96KN3 472 aa16.95■□□□□ 0.3
PFKM-202ENST00000340802 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
PFKM-202ENST00000340802 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
PFKM-202ENST00000340802 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
PFKM-202ENST00000340802 DCAF8L2P0C7V8 631 aa16.89■□□□□ 0.29
PFKM-202ENST00000340802 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
PFKM-202ENST00000340802 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
PFKM-202ENST00000340802 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
PFKM-202ENST00000340802 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
PFKM-202ENST00000340802 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
PFKM-202ENST00000340802 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
PFKM-202ENST00000340802 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
PFKM-202ENST00000340802 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.24
PFKM-202ENST00000340802 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
PFKM-202ENST00000340802 KLHL34Q8N239 644 aa16.55■□□□□ 0.24
PFKM-202ENST00000340802 DEKP35659 375 aaKnown RBP16.48■□□□□ 0.23
PFKM-202ENST00000340802 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
PFKM-202ENST00000340802 PDE4CQ08493 712 aa16.41■□□□□ 0.22
PFKM-202ENST00000340802 SUPT16HQ9Y5B9 1047 aaKnown RBP16.38■□□□□ 0.21
PFKM-202ENST00000340802 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
PFKM-202ENST00000340802 PDIA4P13667 645 aaKnown RBP16.34■□□□□ 0.21
PFKM-202ENST00000340802 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.21
PFKM-202ENST00000340802 NEFLP07196 543 aa16.29■□□□□ 0.2
PFKM-202ENST00000340802 MSH5O43196 834 aa16.29■□□□□ 0.2
PFKM-202ENST00000340802 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
PFKM-202ENST00000340802 BCANQ96GW7 911 aa16.28■□□□□ 0.2
PFKM-202ENST00000340802 TIMELESSQ9UNS1 1208 aa16.26■□□□□ 0.19
PFKM-202ENST00000340802 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
PFKM-202ENST00000340802 RBM19Q9Y4C8 960 aaKnown RBP16.23■□□□□ 0.19
PFKM-202ENST00000340802 ZMYND15Q9H091 742 aa16.22■□□□□ 0.19
PFKM-202ENST00000340802 ERICH6BQ5W0A0 696 aa16.22■□□□□ 0.19
PFKM-202ENST00000340802 SMARCA2P51531 1590 aa16.21■□□□□ 0.19
PFKM-202ENST00000340802 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
PFKM-202ENST00000340802 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
PFKM-202ENST00000340802 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
PFKM-202ENST00000340802 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
PFKM-202ENST00000340802 FGD1P98174 961 aa16.15■□□□□ 0.18
PFKM-202ENST00000340802 CUX2O14529 1486 aa16.14■□□□□ 0.17
PFKM-202ENST00000340802 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
PFKM-202ENST00000340802 NBR1Q14596 966 aa16.11■□□□□ 0.17
PFKM-202ENST00000340802 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
PFKM-202ENST00000340802 RBM10P98175 930 aaKnown RBP16.08■□□□□ 0.16
PFKM-202ENST00000340802 MIER1Q8N108 512 aa16.06■□□□□ 0.16
PFKM-202ENST00000340802 PLPPR3Q6T4P5 718 aa16.06■□□□□ 0.16
PFKM-202ENST00000340802 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
PFKM-202ENST00000340802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
PFKM-202ENST00000340802 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.16
PFKM-202ENST00000340802 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
PFKM-202ENST00000340802 AAMPQ13685 434 aa16.01■□□□□ 0.15
PFKM-202ENST00000340802 RANGAP1P46060 587 aaPredicted RBP15.99■□□□□ 0.15
PFKM-202ENST00000340802 DHX37Q8IY37 1157 aaKnown RBP15.97■□□□□ 0.15
PFKM-202ENST00000340802 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
PFKM-202ENST00000340802 PAXIP1Q6ZW49 1069 aaPredicted RBP15.96■□□□□ 0.15
PFKM-202ENST00000340802 CLSPNQ9HAW4 1339 aa15.96■□□□□ 0.14
PFKM-202ENST00000340802 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
PFKM-202ENST00000340802 ITGAEP38570 1179 aa15.95■□□□□ 0.14
PFKM-202ENST00000340802 CCER1Q8TC90 406 aaPredicted RBP15.94■□□□□ 0.14
PFKM-202ENST00000340802 GLIPR1L2Q4G1C9 344 aa15.93■□□□□ 0.14
PFKM-202ENST00000340802 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
PFKM-202ENST00000340802 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms