Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC10.46□□□□□ -0.73
APOC4P55056 AC005632.3-201ENST00000605544 308 ntBASIC10.46□□□□□ -0.73
APOC4P55056 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC10.46□□□□□ -0.73
APOC4P55056 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC10.46□□□□□ -0.74
APOC4P55056 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
APOC4P55056 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
APOC4P55056 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
APOC4P55056 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.46□□□□□ -0.74
APOC4P55056 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
APOC4P55056 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
APOC4P55056 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC10.46□□□□□ -0.74
APOC4P55056 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
APOC4P55056 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
APOC4P55056 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 AC011498.7-201ENST00000624986 2027 ntBASIC10.45□□□□□ -0.74
APOC4P55056 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 AC015802.1-201ENST00000588104 1449 ntBASIC10.45□□□□□ -0.74
APOC4P55056 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
APOC4P55056 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 AC006480.2-201ENST00000609770 1337 ntBASIC10.45□□□□□ -0.74
APOC4P55056 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC10.45□□□□□ -0.74
APOC4P55056 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC10.45□□□□□ -0.74
APOC4P55056 FGFR3P1-201ENST00000449999 601 ntBASIC10.45□□□□□ -0.74
APOC4P55056 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 CHCHD2P2-201ENST00000503744 321 ntBASIC10.45□□□□□ -0.74
APOC4P55056 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC10.45□□□□□ -0.74
APOC4P55056 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC10.45□□□□□ -0.74
APOC4P55056 ELP5-212ENST00000574255 671 ntTSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC10.45□□□□□ -0.74
APOC4P55056 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC10.45□□□□□ -0.74
APOC4P55056 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC10.45□□□□□ -0.74
APOC4P55056 SIGLEC22P-201ENST00000599104 714 ntBASIC10.45□□□□□ -0.74
APOC4P55056 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC10.45□□□□□ -0.74
APOC4P55056 SIGLEC18P-201ENST00000602271 909 ntBASIC10.45□□□□□ -0.74
APOC4P55056 CDK7-214ENST00000626796 358 ntTSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 AL805961.2-201ENST00000642139 4817 ntBASIC10.45□□□□□ -0.74
APOC4P55056 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
APOC4P55056 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10.45□□□□□ -0.74
APOC4P55056 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
APOC4P55056 AL390755.1-201ENST00000623716 2027 ntBASIC10.45□□□□□ -0.74
APOC4P55056 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms