Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 RPSAP15-201ENST00000448168 861 ntBASIC15.12■□□□□ 0.01
CACNA2D1P54289 AC008723.1-201ENST00000506922 207 ntBASIC15.12■□□□□ 0.01
CACNA2D1P54289 AC140658.4-201ENST00000561990 352 ntBASIC15.12■□□□□ 0.01
CACNA2D1P54289 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 AC084346.2-201ENST00000607097 949 ntBASIC15.12■□□□□ 0.01
CACNA2D1P54289 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.12■□□□□ 0.01
CACNA2D1P54289 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 LINC00115-201ENST00000473798 1317 ntBASIC15.12■□□□□ 0.01
CACNA2D1P54289 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CACNA2D1P54289 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.12■□□□□ 0.01
CACNA2D1P54289 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 KRT17P5-201ENST00000332088 839 ntBASIC15.11■□□□□ 0.01
CACNA2D1P54289 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 EEF1DP6-201ENST00000449232 372 ntBASIC15.11■□□□□ 0.01
CACNA2D1P54289 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AC020910.6-201ENST00000623084 1459 ntBASIC15.11■□□□□ 0.01
CACNA2D1P54289 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CACNA2D1P54289 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CACNA2D1P54289 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CACNA2D1P54289 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CACNA2D1P54289 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms