Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC3P51654 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC3P51654 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC3P51654 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC3P51654 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC3P51654 RPL7P35-201ENST00000446943 740 ntBASIC15.68■□□□□ 0.1
GPC3P51654 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC3P51654 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.68■□□□□ 0.1
GPC3P51654 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.68■□□□□ 0.1
GPC3P51654 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC3P51654 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC3P51654 DNM1P30-201ENST00000563586 452 ntBASIC15.68■□□□□ 0.1
GPC3P51654 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC3P51654 RN7SL736P-201ENST00000613111 269 ntBASIC15.68■□□□□ 0.1
GPC3P51654 AP003419.4-201ENST00000616071 517 ntBASIC15.68■□□□□ 0.1
GPC3P51654 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 AC025262.2-201ENST00000623975 1056 ntBASIC15.68■□□□□ 0.1
GPC3P51654 AC009145.4-201ENST00000625119 1294 ntBASIC15.68■□□□□ 0.1
GPC3P51654 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GPC3P51654 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC3P51654 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC3P51654 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC3P51654 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC3P51654 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GPC3P51654 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GPC3P51654 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC3P51654 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC3P51654 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 HLA-DMA-203ENST00000395305 777 ntBASIC15.67■□□□□ 0.1
GPC3P51654 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.67■□□□□ 0.1
GPC3P51654 AL512306.1-201ENST00000432698 848 ntBASIC15.67■□□□□ 0.1
GPC3P51654 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 AC253536.4-201ENST00000440539 267 ntBASIC15.67■□□□□ 0.1
GPC3P51654 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 LDHBP1-201ENST00000455730 1119 ntBASIC15.67■□□□□ 0.1
GPC3P51654 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.67■□□□□ 0.1
GPC3P51654 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 AL512310.5-201ENST00000551999 515 ntBASIC15.67■□□□□ 0.1
GPC3P51654 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.67■□□□□ 0.1
GPC3P51654 RN7SL665P-201ENST00000578793 300 ntBASIC15.67■□□□□ 0.1
GPC3P51654 AL133467.4-201ENST00000602953 725 ntBASIC15.67■□□□□ 0.1
GPC3P51654 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC3P51654 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 AL591122.2-201ENST00000624125 1853 ntBASIC15.67■□□□□ 0.1
GPC3P51654 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GPC3P51654 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
GPC3P51654 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 TUBB8P4-201ENST00000511806 1324 ntBASIC15.67■□□□□ 0.1
GPC3P51654 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC3P51654 AL022313.4-201ENST00000562756 2046 ntBASIC15.67■□□□□ 0.1
GPC3P51654 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
GPC3P51654 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GPC3P51654 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.66■□□□□ 0.1
GPC3P51654 AC007952.5-201ENST00000572818 1486 ntBASIC15.66■□□□□ 0.1
GPC3P51654 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.66■□□□□ 0.1
GPC3P51654 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
GPC3P51654 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.66■□□□□ 0.1
GPC3P51654 RPL18AP3-201ENST00000462885 528 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms