Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HTR3AP46098 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
HTR3AP46098 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HTR3AP46098 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
HTR3AP46098 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.25□□□□□ -0.29
HTR3AP46098 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HTR3AP46098 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.25□□□□□ -0.29
HTR3AP46098 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HTR3AP46098 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HTR3AP46098 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
HTR3AP46098 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HTR3AP46098 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.24□□□□□ -0.29
HTR3AP46098 AC106818.1-201ENST00000623223 3242 ntBASIC13.24□□□□□ -0.29
HTR3AP46098 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.24□□□□□ -0.29
HTR3AP46098 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.24□□□□□ -0.29
HTR3AP46098 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 E2F3P2-201ENST00000447755 1422 ntBASIC13.24□□□□□ -0.29
HTR3AP46098 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 AC011498.7-201ENST00000624986 2027 ntBASIC13.24□□□□□ -0.29
HTR3AP46098 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.24□□□□□ -0.29
HTR3AP46098 OR8S1-201ENST00000310194 1080 ntBASIC13.24□□□□□ -0.29
HTR3AP46098 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.24□□□□□ -0.29
HTR3AP46098 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.24□□□□□ -0.29
HTR3AP46098 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 AL157407.1-201ENST00000435784 904 ntBASIC13.24□□□□□ -0.29
HTR3AP46098 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.24□□□□□ -0.29
HTR3AP46098 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.24□□□□□ -0.29
HTR3AP46098 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.24□□□□□ -0.29
HTR3AP46098 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.24□□□□□ -0.29
HTR3AP46098 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
HTR3AP46098 RBM8B-201ENST00000555532 525 ntBASIC13.24□□□□□ -0.29
HTR3AP46098 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.24□□□□□ -0.29
HTR3AP46098 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.24□□□□□ -0.29
HTR3AP46098 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.24□□□□□ -0.29
HTR3AP46098 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.24□□□□□ -0.29
HTR3AP46098 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HTR3AP46098 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.24□□□□□ -0.29
HTR3AP46098 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HTR3AP46098 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HTR3AP46098 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.23□□□□□ -0.29
HTR3AP46098 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HTR3AP46098 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.23□□□□□ -0.29
HTR3AP46098 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.23□□□□□ -0.29
HTR3AP46098 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HTR3AP46098 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 AL354877.1-201ENST00000424412 413 ntBASIC13.23□□□□□ -0.29
HTR3AP46098 Z93015.1-201ENST00000451718 390 ntBASIC13.23□□□□□ -0.29
HTR3AP46098 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
HTR3AP46098 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms