Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 KRT8P13-201ENST00000463294 1010 ntBASIC13.11□□□□□ -0.31
NKX2-2O95096 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX2-2O95096 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 RN7SL455P-201ENST00000580629 282 ntBASIC13.11□□□□□ -0.31
NKX2-2O95096 AC244452.3-201ENST00000636814 210 ntBASIC13.11□□□□□ -0.31
NKX2-2O95096 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX2-2O95096 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-2O95096 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-2O95096 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-2O95096 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-2O95096 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 AC138028.6-201ENST00000616106 1482 ntBASIC13.1□□□□□ -0.31
NKX2-2O95096 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NKX2-2O95096 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-2O95096 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-2O95096 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX2-2O95096 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 AC006987.1-201ENST00000413610 527 ntBASIC13.1□□□□□ -0.31
NKX2-2O95096 BX679664.3-201ENST00000414070 555 ntBASIC13.1□□□□□ -0.31
NKX2-2O95096 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 AL596276.2-201ENST00000447525 331 ntBASIC13.1□□□□□ -0.31
NKX2-2O95096 AC113935.1-201ENST00000471722 555 ntBASIC13.1□□□□□ -0.31
NKX2-2O95096 SCARNA20.5-201ENST00000516991 142 ntBASIC13.1□□□□□ -0.31
NKX2-2O95096 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX2-2O95096 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX2-2O95096 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
NKX2-2O95096 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NKX2-2O95096 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-2O95096 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-2O95096 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-2O95096 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-2O95096 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 SALL4P6-201ENST00000429385 1691 ntBASIC13.09□□□□□ -0.31
NKX2-2O95096 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-2O95096 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NKX2-2O95096 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-2O95096 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-2O95096 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms