Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.68□□□□□ -0.54
SSSCA1O60232 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.68□□□□□ -0.54
SSSCA1O60232 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
SSSCA1O60232 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.68□□□□□ -0.54
SSSCA1O60232 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
SSSCA1O60232 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
SSSCA1O60232 AL022342.1-201ENST00000400363 863 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 ACTBP8-201ENST00000403258 1108 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AC254562.1-201ENST00000417586 456 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 TREML5P-201ENST00000421694 576 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.68□□□□□ -0.54
SSSCA1O60232 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.68□□□□□ -0.54
SSSCA1O60232 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.68□□□□□ -0.54
SSSCA1O60232 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.68□□□□□ -0.54
SSSCA1O60232 AC112482.1-201ENST00000492080 688 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 HLA-J-203ENST00000494367 1087 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.68□□□□□ -0.54
SSSCA1O60232 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.68□□□□□ -0.54
SSSCA1O60232 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
SSSCA1O60232 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.68□□□□□ -0.54
SSSCA1O60232 AC023310.3-201ENST00000557027 670 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AC100756.1-201ENST00000562736 682 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AC104794.3-201ENST00000566840 1248 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AC138749.3-201ENST00000567691 622 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AC009407.1-201ENST00000568958 598 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AL158211.3-201ENST00000607385 239 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AC116165.1-201ENST00000611806 668 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.68□□□□□ -0.54
SSSCA1O60232 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.68□□□□□ -0.54
SSSCA1O60232 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SSSCA1O60232 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 AC115284.2-201ENST00000624646 2054 ntBASIC11.67□□□□□ -0.54
SSSCA1O60232 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SSSCA1O60232 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.67□□□□□ -0.54
SSSCA1O60232 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.67□□□□□ -0.54
SSSCA1O60232 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.67□□□□□ -0.54
SSSCA1O60232 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.67□□□□□ -0.54
SSSCA1O60232 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.67□□□□□ -0.54
SSSCA1O60232 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.67□□□□□ -0.54
SSSCA1O60232 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.67□□□□□ -0.54
SSSCA1O60232 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.67□□□□□ -0.54
SSSCA1O60232 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.67□□□□□ -0.54
SSSCA1O60232 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.67□□□□□ -0.54
SSSCA1O60232 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.67□□□□□ -0.54
SSSCA1O60232 SOCS2P1-201ENST00000417727 557 ntBASIC11.67□□□□□ -0.54
SSSCA1O60232 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.67□□□□□ -0.54
SSSCA1O60232 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.67□□□□□ -0.54
SSSCA1O60232 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
SSSCA1O60232 AC097493.3-201ENST00000509725 367 ntBASIC11.67□□□□□ -0.54
SSSCA1O60232 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.67□□□□□ -0.54
SSSCA1O60232 IGHV3-42-201ENST00000520410 361 ntBASIC11.67□□□□□ -0.54
SSSCA1O60232 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.67□□□□□ -0.54
SSSCA1O60232 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.67□□□□□ -0.54
SSSCA1O60232 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.67□□□□□ -0.54
SSSCA1O60232 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 BX088702.1-201ENST00000610784 235 ntBASIC11.67□□□□□ -0.54
SSSCA1O60232 AP005019.2-201ENST00000615104 511 ntBASIC11.67□□□□□ -0.54
SSSCA1O60232 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.67□□□□□ -0.54
SSSCA1O60232 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SSSCA1O60232 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SSSCA1O60232 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SSSCA1O60232 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms