Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.37□□□□□ -0.11
KDELR3O43731 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.37□□□□□ -0.11
KDELR3O43731 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.37□□□□□ -0.11
KDELR3O43731 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.37□□□□□ -0.11
KDELR3O43731 LINC00265-2P-201ENST00000413372 782 ntBASIC14.37□□□□□ -0.11
KDELR3O43731 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.37□□□□□ -0.11
KDELR3O43731 EEF1DP6-201ENST00000449232 372 ntBASIC14.37□□□□□ -0.11
KDELR3O43731 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.37□□□□□ -0.11
KDELR3O43731 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.37□□□□□ -0.11
KDELR3O43731 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.37□□□□□ -0.11
KDELR3O43731 RHOQP1-201ENST00000555758 579 ntBASIC14.37□□□□□ -0.11
KDELR3O43731 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.37□□□□□ -0.11
KDELR3O43731 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.37□□□□□ -0.11
KDELR3O43731 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
KDELR3O43731 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
KDELR3O43731 CR392039.2-201ENST00000623182 509 ntBASIC14.37□□□□□ -0.11
KDELR3O43731 AC051619.9-201ENST00000623237 597 ntBASIC14.37□□□□□ -0.11
KDELR3O43731 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 AGAP10P-201ENST00000454844 2418 ntBASIC14.37□□□□□ -0.11
KDELR3O43731 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 TEKT4P2-202ENST00000559466 1312 ntBASIC14.37□□□□□ -0.11
KDELR3O43731 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
KDELR3O43731 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
KDELR3O43731 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KDELR3O43731 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
KDELR3O43731 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KDELR3O43731 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KDELR3O43731 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
KDELR3O43731 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.36□□□□□ -0.11
KDELR3O43731 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.36□□□□□ -0.11
KDELR3O43731 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.36□□□□□ -0.11
KDELR3O43731 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.36□□□□□ -0.11
KDELR3O43731 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
KDELR3O43731 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.36□□□□□ -0.11
KDELR3O43731 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
KDELR3O43731 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.36□□□□□ -0.11
KDELR3O43731 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.36□□□□□ -0.11
KDELR3O43731 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.36□□□□□ -0.11
KDELR3O43731 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.36□□□□□ -0.11
KDELR3O43731 NDUFS6P1-201ENST00000485187 316 ntBASIC14.36□□□□□ -0.11
KDELR3O43731 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.36□□□□□ -0.11
KDELR3O43731 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
KDELR3O43731 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.36□□□□□ -0.11
KDELR3O43731 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.36□□□□□ -0.11
KDELR3O43731 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.36□□□□□ -0.11
KDELR3O43731 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
KDELR3O43731 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KDELR3O43731 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.36□□□□□ -0.11
KDELR3O43731 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms