Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC119751.2-201ENST00000504529 210 ntBASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC100850.1-201ENST00000506768 649 ntBASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 MIR4741-201ENST00000579822 90 ntBASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC009955.4-201ENST00000597192 544 ntBASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC010328.2-201ENST00000597698 1111 ntBASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 MIR6720-201ENST00000611664 98 ntBASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC114271.1-201ENST00000612689 2813 ntBASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 TNN-202ENST00000621086 4234 ntTSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 ATP5G2P4-201ENST00000442175 420 ntBASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 Z93015.1-201ENST00000451718 390 ntBASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 RNA5SP412-201ENST00000516234 123 ntBASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 AC100827.2-201ENST00000563214 1194 ntBASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 TCAM1P-207ENST00000485295 1537 ntBASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms