Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN18Q99952 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PTPN18Q99952 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 U73169.1-201ENST00000395152 367 ntBASIC15.96■□□□□ 0.15
PTPN18Q99952 AC041040.1-201ENST00000425197 460 ntBASIC15.96■□□□□ 0.15
PTPN18Q99952 AC005722.1-201ENST00000431878 964 ntBASIC15.96■□□□□ 0.15
PTPN18Q99952 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.96■□□□□ 0.15
PTPN18Q99952 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN18Q99952 GYG1-209ENST00000483267 801 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.96■□□□□ 0.15
PTPN18Q99952 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 GRAMD4P6-201ENST00000556999 244 ntBASIC15.96■□□□□ 0.15
PTPN18Q99952 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC15.96■□□□□ 0.15
PTPN18Q99952 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN18Q99952 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN18Q99952 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN18Q99952 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN18Q99952 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC15.96■□□□□ 0.15
PTPN18Q99952 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
PTPN18Q99952 AC006986.1-201ENST00000612764 241 ntBASIC15.96■□□□□ 0.15
PTPN18Q99952 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN18Q99952 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN18Q99952 AC132872.4-202ENST00000622924 2756 ntBASIC15.96■□□□□ 0.15
PTPN18Q99952 AL121753.2-201ENST00000624581 1461 ntBASIC15.96■□□□□ 0.14
PTPN18Q99952 AC008741.2-201ENST00000612792 3115 ntBASIC15.96■□□□□ 0.14
PTPN18Q99952 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN18Q99952 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN18Q99952 NFIC-211ENST00000641145 8399 ntBASIC15.95■□□□□ 0.14
PTPN18Q99952 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN18Q99952 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 AL513477.1-201ENST00000602865 2407 ntBASIC15.95■□□□□ 0.14
PTPN18Q99952 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PTPN18Q99952 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.95■□□□□ 0.14
PTPN18Q99952 HNRNPA3P12-201ENST00000437410 1063 ntBASIC15.95■□□□□ 0.14
PTPN18Q99952 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC15.95■□□□□ 0.14
PTPN18Q99952 RPL29P2-201ENST00000488409 460 ntBASIC15.95■□□□□ 0.14
PTPN18Q99952 MARK2P17-201ENST00000498560 841 ntBASIC15.95■□□□□ 0.14
PTPN18Q99952 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC15.95■□□□□ 0.14
PTPN18Q99952 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.95■□□□□ 0.14
PTPN18Q99952 PHBP18-201ENST00000546648 813 ntBASIC15.95■□□□□ 0.14
PTPN18Q99952 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 RN7SL440P-201ENST00000577855 343 ntBASIC15.95■□□□□ 0.14
PTPN18Q99952 PRR20FP-201ENST00000603320 180 ntBASIC15.95■□□□□ 0.14
PTPN18Q99952 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PTPN18Q99952 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN18Q99952 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PTPN18Q99952 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PTPN18Q99952 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN18Q99952 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN18Q99952 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN18Q99952 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PTPN18Q99952 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC15.94■□□□□ 0.14
PTPN18Q99952 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.94■□□□□ 0.14
PTPN18Q99952 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PTPN18Q99952 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
PTPN18Q99952 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN18Q99952 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN18Q99952 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN18Q99952 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN18Q99952 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN18Q99952 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN18Q99952 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.94■□□□□ 0.14
PTPN18Q99952 TCAF2P1-201ENST00000291129 2421 ntBASIC15.94■□□□□ 0.14
PTPN18Q99952 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN18Q99952 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms