Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 AC104758.3-203ENST00000562938 2123 ntBASIC12.61□□□□□ -0.39
AP3S1Q92572 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
AP3S1Q92572 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AP3S1Q92572 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
AP3S1Q92572 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
AP3S1Q92572 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 AL627223.1-201ENST00000416693 442 ntBASIC12.6□□□□□ -0.39
AP3S1Q92572 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.6□□□□□ -0.39
AP3S1Q92572 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.6□□□□□ -0.39
AP3S1Q92572 AC092337.1-201ENST00000568699 1129 ntBASIC12.6□□□□□ -0.39
AP3S1Q92572 RN7SL510P-201ENST00000581311 263 ntBASIC12.6□□□□□ -0.39
AP3S1Q92572 FAM95B1-212ENST00000592873 4692 ntBASIC12.6□□□□□ -0.39
AP3S1Q92572 BX088702.1-201ENST00000610784 235 ntBASIC12.6□□□□□ -0.39
AP3S1Q92572 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 AP003969.2-201ENST00000623739 2275 ntBASIC12.6□□□□□ -0.39
AP3S1Q92572 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 AC022364.1-202ENST00000617468 2409 ntBASIC12.6□□□□□ -0.39
AP3S1Q92572 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.6□□□□□ -0.39
AP3S1Q92572 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
AP3S1Q92572 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.6□□□□□ -0.39
AP3S1Q92572 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AP3S1Q92572 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S1Q92572 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
AP3S1Q92572 AC061965.1-201ENST00000560524 1465 ntBASIC12.59□□□□□ -0.39
AP3S1Q92572 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
AP3S1Q92572 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
AP3S1Q92572 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 LRRC59-203ENST00000576448 1531 ntBASIC12.59□□□□□ -0.39
AP3S1Q92572 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
AP3S1Q92572 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.59□□□□□ -0.39
AP3S1Q92572 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.59□□□□□ -0.39
AP3S1Q92572 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
AP3S1Q92572 MCCD1P2-201ENST00000423228 335 ntBASIC12.59□□□□□ -0.39
AP3S1Q92572 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 GPS2P2-201ENST00000430745 888 ntBASIC12.59□□□□□ -0.39
AP3S1Q92572 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.59□□□□□ -0.39
AP3S1Q92572 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S1Q92572 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
AP3S1Q92572 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.59□□□□□ -0.39
AP3S1Q92572 AC036164.1-201ENST00000570544 333 ntBASIC12.59□□□□□ -0.39
AP3S1Q92572 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.59□□□□□ -0.39
AP3S1Q92572 AL049840.4-201ENST00000602422 811 ntBASIC12.59□□□□□ -0.39
AP3S1Q92572 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms