Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 KRT8P43-201ENST00000406052 1458 ntBASIC16.7■□□□□ 0.26
STAG1Q8WVM7 AC061965.1-201ENST00000560524 1465 ntBASIC16.7■□□□□ 0.26
STAG1Q8WVM7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 AL592076.1-201ENST00000424448 303 ntBASIC16.7■□□□□ 0.26
STAG1Q8WVM7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 SLC25A15P3-201ENST00000505530 290 ntBASIC16.7■□□□□ 0.26
STAG1Q8WVM7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 MIR4722-201ENST00000578292 60 ntBASIC16.7■□□□□ 0.26
STAG1Q8WVM7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 AC103810.10-201ENST00000606504 343 ntBASIC16.7■□□□□ 0.26
STAG1Q8WVM7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.7■□□□□ 0.26
STAG1Q8WVM7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.7■□□□□ 0.26
STAG1Q8WVM7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 FGFR3P1-201ENST00000449999 601 ntBASIC16.69■□□□□ 0.26
STAG1Q8WVM7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 RPL18AP8-201ENST00000486071 528 ntBASIC16.69■□□□□ 0.26
STAG1Q8WVM7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 RN7SL665P-201ENST00000578793 300 ntBASIC16.69■□□□□ 0.26
STAG1Q8WVM7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.69■□□□□ 0.26
STAG1Q8WVM7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
STAG1Q8WVM7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
STAG1Q8WVM7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms