Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC00115-201ENST00000473798 1317 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AL157823.1-201ENST00000403727 628 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 HNRNPA3P6-201ENST00000472163 1006 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 PPP1R2P10-201ENST00000393023 595 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ACTBP14-201ENST00000411655 1089 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AC093300.1-201ENST00000510368 1201 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 DERL2-206ENST00000572834 589 ntTSL 3 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AC022966.2-201ENST00000587434 367 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AL031768.1-201ENST00000606542 701 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AL391005.1-201ENST00000623953 2435 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 GOLGA8UP-201ENST00000527159 1755 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 GRPEL2P1-201ENST00000453145 339 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 TBC1D3P6-201ENST00000505954 962 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 RNA5SP420-201ENST00000516997 137 ntBASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms