Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 RTN3P1-201ENST00000536295 711 ntBASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AC140658.4-201ENST00000561990 352 ntBASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 MIR6074-201ENST00000612054 107 ntBASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AC113367.3-201ENST00000508316 1912 ntBASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM48Q8IWZ4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.08□□□□□ -0.15
TRIM48Q8IWZ4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM48Q8IWZ4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM48Q8IWZ4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM48Q8IWZ4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 AC073150.1-201ENST00000450406 1084 ntBASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 IMP3P2-201ENST00000489760 475 ntBASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 RHOQP1-201ENST00000555758 579 ntBASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 RN7SL574P-201ENST00000581512 297 ntBASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM48Q8IWZ4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 RNA5SP359-201ENST00000364838 113 ntBASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 RN7SL530P-201ENST00000485097 298 ntBASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 AC008723.1-201ENST00000506922 207 ntBASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 406.3 ms