Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 AC132938.2-201ENST00000579188 680 ntBASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 AL591163.1-201ENST00000641757 987 ntBASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 AC019294.4-201ENST00000561777 2905 ntBASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL136309.1-201ENST00000403917 691 ntBASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL512384.1-201ENST00000406683 331 ntBASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL358472.3-201ENST00000608147 415 ntBASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 AL136301.1-201ENST00000615830 422 ntBASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC50Q8IVM0 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 USP17L6P-201ENST00000382470 1197 ntBASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 MIR1202-201ENST00000408529 83 ntBASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 AC112492.5-201ENST00000421897 457 ntBASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms