Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPAS4Q8IUM7 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPAS4Q8IUM7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
NPAS4Q8IUM7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PTGER4P2-201ENST00000328411 252 ntBASIC15.08■□□□□ 0
NPAS4Q8IUM7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 AL451000.1-201ENST00000451300 1186 ntBASIC15.08■□□□□ 0
NPAS4Q8IUM7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PTGER4P3-201ENST00000458150 252 ntBASIC15.08■□□□□ 0
NPAS4Q8IUM7 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 BAK1P2-201ENST00000532665 631 ntBASIC15.08■□□□□ 0
NPAS4Q8IUM7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 AC073869.4-201ENST00000620841 800 ntBASIC15.08■□□□□ 0
NPAS4Q8IUM7 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.08■□□□□ 0
NPAS4Q8IUM7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPAS4Q8IUM7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 AC015909.5-201ENST00000624336 2266 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 GEMIN8P4-201ENST00000380526 729 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 RN7SL288P-201ENST00000490496 291 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 TYMSP2-201ENST00000589501 424 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 AP003392.6-201ENST00000607709 325 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 TUBB8P4-201ENST00000511806 1324 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 INTS4P1-203ENST00000641008 3683 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 HSPA8P5-201ENST00000456928 2069 ntBASIC15.07■□□□□ 0
NPAS4Q8IUM7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS4Q8IUM7 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.07■□□□□ 0
NPAS4Q8IUM7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms