Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 MIR645-201ENST00000385283 94 ntBASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 Z97180.1-201ENST00000445173 988 ntBASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 AL139099.5-201ENST00000635274 300 ntBASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 KRT18P9-201ENST00000604826 1300 ntBASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 AC004554.1-201ENST00000422830 1468 ntBASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 AC025183.3-201ENST00000623526 1482 ntBASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC41PQ6P2S7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 AC093462.1-201ENST00000621167 1683 ntBASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 SNORA50C-201ENST00000408535 133 ntBASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 AC242376.1-201ENST00000559033 726 ntBASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 AC020922.3-201ENST00000595064 547 ntBASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 SNORA50.1-201ENST00000628590 135 ntBASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.21■□□□□ 0.34
TTC41PQ6P2S7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 AC026320.2-201ENST00000434379 478 ntBASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.2■□□□□ 0.34
TTC41PQ6P2S7 AC008723.1-201ENST00000506922 207 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms