Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 AC006987.1-201ENST00000413610 527 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 GUSBP10-201ENST00000417412 665 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 OR51A6P-201ENST00000418680 1004 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 ERP29P1-201ENST00000442902 706 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 MTND2P31-201ENST00000512602 616 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 TMCO5B-205ENST00000530020 894 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 AL512310.5-201ENST00000551999 515 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 NUDT4P2-201ENST00000578341 546 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 SIGLEC22P-201ENST00000599104 714 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 AL009178.2-201ENST00000597278 2719 ntBASIC15.15■□□□□ 0.02
VARS2Q5ST30 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC007686.3-201ENST00000619017 3487 ntBASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.14■□□□□ 0.01
VARS2Q5ST30 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC005740.1-201ENST00000515639 522 ntBASIC15.14■□□□□ 0.01
VARS2Q5ST30 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 HERC2P11-201ENST00000562845 725 ntBASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC100756.2-201ENST00000569537 736 ntBASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC073911.3-201ENST00000624401 631 ntBASIC15.14■□□□□ 0.01
VARS2Q5ST30 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC015656.1-201ENST00000624209 3578 ntBASIC15.14■□□□□ 0.01
VARS2Q5ST30 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VARS2Q5ST30 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARS2Q5ST30 AC140479.7-201ENST00000636301 2332 ntBASIC15.14■□□□□ 0.01
VARS2Q5ST30 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms