Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC104692.2-201ENST00000603054 253 ntBASIC12.3□□□□□ -0.44
AP3S2P59780 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.3□□□□□ -0.44
AP3S2P59780 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
AP3S2P59780 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S2P59780 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
AP3S2P59780 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
AP3S2P59780 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S2P59780 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S2P59780 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S2P59780 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.29□□□□□ -0.44
AP3S2P59780 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 AL627223.1-201ENST00000416693 442 ntBASIC12.29□□□□□ -0.44
AP3S2P59780 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S2P59780 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 LINC02084-201ENST00000606069 1096 ntBASIC12.29□□□□□ -0.44
AP3S2P59780 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S2P59780 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
AP3S2P59780 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
AP3S2P59780 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
AP3S2P59780 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
AP3S2P59780 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S2P59780 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 AC015819.3-201ENST00000624305 2674 ntBASIC12.28□□□□□ -0.44
AP3S2P59780 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
AP3S2P59780 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.28□□□□□ -0.44
AP3S2P59780 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
AP3S2P59780 MCCD1P2-201ENST00000423228 335 ntBASIC12.28□□□□□ -0.44
AP3S2P59780 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 AC092337.1-201ENST00000568699 1129 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms