Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
APOC4P55056 OR2K2-202ENST00000374428 1038 ntBASIC10.47□□□□□ -0.73
APOC4P55056 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 AP000356.3-201ENST00000382243 753 ntBASIC10.47□□□□□ -0.73
APOC4P55056 BAX-205ENST00000391871 687 ntTSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 HPGD-203ENST00000422112 805 ntTSL 2 BASIC10.47□□□□□ -0.73
APOC4P55056 AC098934.1-203ENST00000442868 1262 ntBASIC10.47□□□□□ -0.73
APOC4P55056 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 NAGK-204ENST00000443872 878 ntTSL 3 BASIC10.47□□□□□ -0.73
APOC4P55056 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.47□□□□□ -0.73
APOC4P55056 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC10.47□□□□□ -0.73
APOC4P55056 ALG1L13P-202ENST00000519320 584 ntBASIC10.47□□□□□ -0.73
APOC4P55056 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC10.47□□□□□ -0.73
APOC4P55056 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC10.47□□□□□ -0.73
APOC4P55056 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC10.47□□□□□ -0.73
APOC4P55056 MEG3_2.1-201ENST00000611456 105 ntBASIC10.47□□□□□ -0.73
APOC4P55056 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 AC074138.1-201ENST00000611182 1303 ntBASIC10.47□□□□□ -0.73
APOC4P55056 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.47□□□□□ -0.73
APOC4P55056 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
APOC4P55056 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
APOC4P55056 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.47□□□□□ -0.73
APOC4P55056 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
APOC4P55056 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.46□□□□□ -0.73
APOC4P55056 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.46□□□□□ -0.73
APOC4P55056 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.46□□□□□ -0.73
APOC4P55056 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 SAT1-201ENST00000379251 801 ntTSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 SAT1-202ENST00000379253 909 ntTSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 SAT1-203ENST00000379254 868 ntTSL 3 BASIC10.46□□□□□ -0.73
APOC4P55056 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 MIR557-201ENST00000385239 98 ntBASIC10.46□□□□□ -0.73
APOC4P55056 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
APOC4P55056 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 GGCT-203ENST00000409144 836 ntTSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC10.46□□□□□ -0.73
APOC4P55056 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC10.46□□□□□ -0.73
APOC4P55056 AC079112.1-201ENST00000454972 939 ntBASIC10.46□□□□□ -0.73
APOC4P55056 RN7SL81P-201ENST00000493781 261 ntBASIC10.46□□□□□ -0.73
APOC4P55056 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC10.46□□□□□ -0.73
APOC4P55056 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
APOC4P55056 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
APOC4P55056 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC10.46□□□□□ -0.73
APOC4P55056 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms