Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LHX2P50458 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.68□□□□□ -0.38
LHX2P50458 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.68□□□□□ -0.38
LHX2P50458 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.68□□□□□ -0.38
LHX2P50458 AL139158.3-201ENST00000641212 1562 ntBASIC12.68□□□□□ -0.38
LHX2P50458 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LHX2P50458 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
LHX2P50458 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LHX2P50458 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LHX2P50458 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LHX2P50458 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 AC068760.1-201ENST00000493579 1953 ntBASIC12.67□□□□□ -0.38
LHX2P50458 KRT8P43-201ENST00000406052 1458 ntBASIC12.67□□□□□ -0.38
LHX2P50458 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.67□□□□□ -0.38
LHX2P50458 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 ERP29P1-201ENST00000442902 706 ntBASIC12.67□□□□□ -0.38
LHX2P50458 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 AC018638.5-201ENST00000450885 754 ntBASIC12.67□□□□□ -0.38
LHX2P50458 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.67□□□□□ -0.38
LHX2P50458 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.67□□□□□ -0.38
LHX2P50458 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 AP002803.1-201ENST00000528836 498 ntBASIC12.67□□□□□ -0.38
LHX2P50458 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
LHX2P50458 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.67□□□□□ -0.38
LHX2P50458 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.67□□□□□ -0.38
LHX2P50458 MIR3147-201ENST00000577811 66 ntBASIC12.67□□□□□ -0.38
LHX2P50458 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.67□□□□□ -0.38
LHX2P50458 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.67□□□□□ -0.38
LHX2P50458 AC018635.2-201ENST00000608625 364 ntBASIC12.67□□□□□ -0.38
LHX2P50458 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LHX2P50458 COX6A1P2-201ENST00000620597 330 ntBASIC12.67□□□□□ -0.38
LHX2P50458 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 KRT8P18-201ENST00000413425 1445 ntBASIC12.67□□□□□ -0.38
LHX2P50458 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LHX2P50458 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.67□□□□□ -0.38
LHX2P50458 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.67□□□□□ -0.38
LHX2P50458 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LHX2P50458 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.66□□□□□ -0.38
LHX2P50458 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.66□□□□□ -0.38
LHX2P50458 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.66□□□□□ -0.38
LHX2P50458 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LHX2P50458 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LHX2P50458 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms