Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRIM23P36406 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM23P36406 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM23P36406 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM23P36406 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 RPL7P35-201ENST00000446943 740 ntBASIC13.99□□□□□ -0.17
TRIM23P36406 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRIM23P36406 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.99□□□□□ -0.17
TRIM23P36406 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM23P36406 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM23P36406 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM23P36406 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM23P36406 MIR2392-201ENST00000584881 84 ntBASIC13.99□□□□□ -0.17
TRIM23P36406 RPL17P45-201ENST00000586289 509 ntBASIC13.99□□□□□ -0.17
TRIM23P36406 AC007881.3-201ENST00000608897 607 ntBASIC13.99□□□□□ -0.17
TRIM23P36406 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM23P36406 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM23P36406 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM23P36406 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRIM23P36406 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRIM23P36406 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRIM23P36406 TCAM1P-207ENST00000485295 1537 ntBASIC13.99□□□□□ -0.17
TRIM23P36406 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM23P36406 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
TRIM23P36406 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM23P36406 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRIM23P36406 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM23P36406 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 AC152010.1-201ENST00000415779 2006 ntBASIC13.98□□□□□ -0.17
TRIM23P36406 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRIM23P36406 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.98□□□□□ -0.17
TRIM23P36406 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 RPSAP31-201ENST00000416648 895 ntBASIC13.98□□□□□ -0.17
TRIM23P36406 GUSBP10-201ENST00000417412 665 ntBASIC13.98□□□□□ -0.17
TRIM23P36406 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 ERP29P1-201ENST00000442902 706 ntBASIC13.98□□□□□ -0.17
TRIM23P36406 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 MPRIPP1-201ENST00000452433 1089 ntBASIC13.98□□□□□ -0.17
TRIM23P36406 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.98□□□□□ -0.17
TRIM23P36406 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.98□□□□□ -0.17
TRIM23P36406 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TRIM23P36406 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.98□□□□□ -0.17
TRIM23P36406 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM23P36406 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRIM23P36406 AC011491.1-203ENST00000637688 543 ntBASIC13.98□□□□□ -0.17
TRIM23P36406 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM23P36406 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRIM23P36406 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRIM23P36406 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRIM23P36406 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM23P36406 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM23P36406 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM23P36406 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.97□□□□□ -0.17
TRIM23P36406 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRIM23P36406 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRIM23P36406 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms