Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.54□□□□□ -0.72
CKS2P33552 HTR5BP-201ENST00000430851 1154 ntBASIC10.54□□□□□ -0.72
CKS2P33552 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.54□□□□□ -0.72
CKS2P33552 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 GCOM2-201ENST00000509133 1104 ntBASIC10.54□□□□□ -0.72
CKS2P33552 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.54□□□□□ -0.72
CKS2P33552 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.54□□□□□ -0.72
CKS2P33552 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.54□□□□□ -0.72
CKS2P33552 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.54□□□□□ -0.72
CKS2P33552 AC010336.2-201ENST00000564226 506 ntBASIC10.54□□□□□ -0.72
CKS2P33552 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 AC093813.1-201ENST00000605066 256 ntBASIC10.54□□□□□ -0.72
CKS2P33552 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.54□□□□□ -0.72
CKS2P33552 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 AL158212.4-201ENST00000624062 1286 ntBASIC10.54□□□□□ -0.72
CKS2P33552 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CKS2P33552 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CKS2P33552 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC10.54□□□□□ -0.72
CKS2P33552 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CKS2P33552 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CKS2P33552 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC10.53□□□□□ -0.72
CKS2P33552 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.53□□□□□ -0.72
CKS2P33552 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 CENPM-205ENST00000404067 905 ntTSL 3 BASIC10.53□□□□□ -0.72
CKS2P33552 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms