Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 GMPR2-202ENST00000355299 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.139e-9■■□□□ 11.8
U2AF2P26368 GMPR2-218ENST00000559287 1748 ntTSL 1 (best)14.21□□□□□ -0.149e-9■■□□□ 11.8
U2AF2P26368 GMPR2-214ENST00000558865 735 ntTSL 512.88□□□□□ -0.359e-9■■□□□ 11.8
U2AF2P26368 GMPR2-226ENST00000560139 583 ntTSL 512.54□□□□□ -0.49e-9■■□□□ 11.8
U2AF2P26368 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.679e-9■■□□□ 11.8
U2AF2P26368 GMPR2-228ENST00000561035 877 ntTSL 510.04□□□□□ -0.89e-9■■□□□ 11.8
U2AF2P26368 GMPR2-212ENST00000558760 817 ntTSL 29.38□□□□□ -0.919e-9■■□□□ 11.8
U2AF2P26368 GMPR2-216ENST00000559102 721 ntTSL 38.26□□□□□ -1.099e-9■■□□□ 11.8
U2AF2P26368 GMPR2-230ENST00000561130 842 ntTSL 38.16□□□□□ -1.19e-9■■□□□ 11.8
U2AF2P26368 GMPR2-208ENST00000558279 346 ntTSL 28.08□□□□□ -1.129e-9■■□□□ 11.8
U2AF2P26368 GMPR2-219ENST00000559409 601 ntTSL 36.63□□□□□ -1.359e-9■■□□□ 11.8
U2AF2P26368 GMPR2-210ENST00000558701 402 ntTSL 34.33□□□□□ -1.729e-9■■□□□ 11.8
U2AF2P26368 DIMT1-203ENST00000509182 961 ntTSL 224.29■■□□□ 1.482e-7■■□□□ 11.8
U2AF2P26368 DIMT1-205ENST00000514911 1034 ntTSL 524.29■■□□□ 1.482e-7■■□□□ 11.8
U2AF2P26368 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.92■■□□□ 1.262e-7■■□□□ 11.8
U2AF2P26368 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.652e-7■■□□□ 11.8
U2AF2P26368 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.43■□□□□ 0.385e-7■■□□□ 11.8
U2AF2P26368 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.43■□□□□ 0.385e-7■■□□□ 11.8
U2AF2P26368 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)21.66■■□□□ 1.061e-7■■□□□ 11.8
U2AF2P26368 ANKHD1-218ENST00000506755 522 ntTSL 33.61□□□□□ -1.832e-22■■□□□ 11.8
U2AF2P26368 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.662e-9■■□□□ 11.8
U2AF2P26368 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.062e-9■■□□□ 11.8
U2AF2P26368 CCT6A-207ENST00000492618 692 ntTSL 311.59□□□□□ -0.552e-9■■□□□ 11.8
U2AF2P26368 VARS-217ENST00000440048 804 ntTSL 1 (best)26.54■■□□□ 1.844e-14■■□□□ 11.8
U2AF2P26368 EWSR1-221ENST00000610553 2300 ntTSL 219.99■□□□□ 0.794e-14■■□□□ 11.8
U2AF2P26368 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.694e-14■■□□□ 11.8
U2AF2P26368 KDM5D-208ENST00000485154 792 ntTSL 210.96□□□□□ -0.654e-14■■□□□ 11.8
U2AF2P26368 TTC21B-203ENST00000464374 1844 ntTSL 1 (best)7.82□□□□□ -1.161e-6■■□□□ 11.8
U2AF2P26368 PRPF40A-205ENST00000467114 546 ntTSL 42.52□□□□□ -2.013e-9■■□□□ 11.8
U2AF2P26368 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.6□□□□□ -1.992e-6■■□□□ 11.8
U2AF2P26368 PAQR3-210ENST00000512760 1431 ntTSL 1 (best)27.83■■■□□ 2.055e-7■■□□□ 11.8
U2AF2P26368 PAQR3-201ENST00000342820 2153 ntTSL 1 (best)27.31■■□□□ 1.965e-7■■□□□ 11.8
U2AF2P26368 PAQR3-202ENST00000395594 3995 ntTSL 1 (best)18.1■□□□□ 0.495e-7■■□□□ 11.8
U2AF2P26368 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.035e-7■■□□□ 11.8
U2AF2P26368 PAQR3-207ENST00000511594 2288 ntTSL 512.95□□□□□ -0.345e-7■■□□□ 11.8
U2AF2P26368 PAQR3-206ENST00000508599 549 ntTSL 412.36□□□□□ -0.435e-7■■□□□ 11.8
U2AF2P26368 PAQR3-208ENST00000512299 597 ntTSL 411.48□□□□□ -0.575e-7■■□□□ 11.8
U2AF2P26368 SRP54-210ENST00000556380 600 ntTSL 310.93□□□□□ -0.666e-10■■□□□ 11.8
U2AF2P26368 PAQR3-212ENST00000515853 3370 ntTSL 1 (best)7.85□□□□□ -1.155e-7■■□□□ 11.8
U2AF2P26368 HMGCR-213ENST00000515776 501 ntTSL 24.69□□□□□ -1.669e-12■■□□□ 11.8
U2AF2P26368 PAQR3-205ENST00000505735 570 ntTSL 32.19□□□□□ -2.065e-7■■□□□ 11.8
U2AF2P26368 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.32□□□□□ -2.26e-10■■□□□ 11.8
U2AF2P26368 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-11■■□□□ 11.8
U2AF2P26368 CAPZA1-206ENST00000498626 650 ntTSL 58.91□□□□□ -0.983e-11■■□□□ 11.8
U2AF2P26368 CAPZA1-204ENST00000476936 867 ntTSL 36.58□□□□□ -1.363e-11■■□□□ 11.8
U2AF2P26368 SEC31A-213ENST00000503937 1564 ntTSL 1 (best)9.36□□□□□ -0.917e-11■■□□□ 11.8
U2AF2P26368 ACSS3-206ENST00000549175 534 ntTSL 513.84□□□□□ -0.191e-7■■□□□ 11.8
U2AF2P26368 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.226e-7■■□□□ 11.8
U2AF2P26368 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.571e-6■■□□□ 11.8
U2AF2P26368 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.364e-7■■□□□ 11.8
U2AF2P26368 EDC4-204ENST00000572221 5267 ntTSL 222.79■■□□□ 1.244e-7■■□□□ 11.8
U2AF2P26368 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.871e-6■■□□□ 11.8
U2AF2P26368 EDC4-214ENST00000577105 580 ntTSL 317.57■□□□□ 0.41e-6■■□□□ 11.8
U2AF2P26368 EDC4-209ENST00000575033 530 ntTSL 314.03□□□□□ -0.161e-6■■□□□ 11.8
U2AF2P26368 EDC4-207ENST00000573992 3934 ntTSL 1 (best)13.9□□□□□ -0.184e-7■■□□□ 11.8
U2AF2P26368 AC040162.3-201ENST00000572067 3907 ntBASIC12.08□□□□□ -0.481e-6■■□□□ 11.8
U2AF2P26368 EDC4-206ENST00000573985 482 ntTSL 39.99□□□□□ -0.811e-6■■□□□ 11.8
U2AF2P26368 ZNF32-203ENST00000485351 471 ntTSL 29.7□□□□□ -0.861e-6■■□□□ 11.8
U2AF2P26368 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.453e-6■■□□□ 11.8
U2AF2P26368 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.713e-6■■□□□ 11.8
U2AF2P26368 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC10.15□□□□□ -0.783e-6■■□□□ 11.8
U2AF2P26368 MAPK8-203ENST00000374176 5628 ntAPPRIS P5 TSL 1 (best)9.69□□□□□ -0.863e-6■■□□□ 11.8
U2AF2P26368 MAPK8-204ENST00000374179 5637 ntTSL 1 (best)9.67□□□□□ -0.863e-6■■□□□ 11.8
U2AF2P26368 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC9.35□□□□□ -0.913e-6■■□□□ 11.8
U2AF2P26368 MAPK8-213ENST00000469879 537 ntTSL 55.94□□□□□ -1.463e-6■■□□□ 11.8
U2AF2P26368 CCDC26-203ENST00000523151 1496 ntTSL 1 (best)10.13□□□□□ -0.792e-10■■□□□ 11.8
U2AF2P26368 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.42□□□□□ -1.382e-10■■□□□ 11.8
U2AF2P26368 GPT2-203ENST00000562132 554 ntTSL 416.5■□□□□ 0.231e-7■■□□□ 11.8
U2AF2P26368 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.871e-7■■□□□ 11.8
U2AF2P26368 CHRD-208ENST00000460627 4719 ntTSL 219.25■□□□□ 0.671e-7■■□□□ 11.8
U2AF2P26368 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.61e-7■■□□□ 11.8
U2AF2P26368 CHRD-205ENST00000448472 3547 ntTSL 1 (best)18.82■□□□□ 0.61e-7■■□□□ 11.8
U2AF2P26368 CHRD-204ENST00000420973 3492 ntTSL 1 (best)17.49■□□□□ 0.391e-7■■□□□ 11.8
U2AF2P26368 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.291e-7■■□□□ 11.8
U2AF2P26368 CHRD-212ENST00000470150 4234 ntTSL 216.31■□□□□ 0.21e-7■■□□□ 11.8
U2AF2P26368 ACADVL-225ENST00000581378 752 ntTSL 318.77■□□□□ 0.62e-11■■□□□ 11.8
U2AF2P26368 WNK4-205ENST00000592072 1613 ntTSL 223.95■■□□□ 1.432e-6■■□□□ 11.8
U2AF2P26368 WNK4-202ENST00000587705 586 ntTSL 420.32■□□□□ 0.842e-6■■□□□ 11.8
U2AF2P26368 SMAD5-209ENST00000514777 588 ntTSL 314.2□□□□□ -0.141e-11■■□□□ 11.8
U2AF2P26368 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.321e-11■■□□□ 11.8
U2AF2P26368 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.541e-11■■□□□ 11.8
U2AF2P26368 PUS7-204ENST00000481939 2436 ntTSL 519.67■□□□□ 0.742e-6■■□□□ 11.8
U2AF2P26368 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.442e-6■■□□□ 11.8
U2AF2P26368 PUS7-201ENST00000356362 3480 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.442e-6■■□□□ 11.8
U2AF2P26368 WDR59-205ENST00000562371 562 ntTSL 211.13□□□□□ -0.632e-6■■□□□ 11.8
U2AF2P26368 ERCC6L2-205ENST00000456993 1822 ntTSL 1 (best)6.97□□□□□ -1.297e-7■■□□□ 11.8
U2AF2P26368 FREM1-206ENST00000466679 741 ntTSL 312.07□□□□□ -0.485e-17■■□□□ 11.8
U2AF2P26368 HECTD1-217ENST00000557369 554 ntTSL 45.66□□□□□ -1.57e-8■■□□□ 11.8
U2AF2P26368 RPS6KA3-203ENST00000457145 804 ntTSL 22.55□□□□□ -22e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.955e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.915e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-207ENST00000602499 744 ntTSL 224.99■■□□□ 1.595e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-206ENST00000602479 752 ntTSL 324.05■■□□□ 1.445e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.285e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.095e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-203ENST00000602291 766 ntTSL 310.66□□□□□ -0.75e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-204ENST00000602303 654 ntTSL 57.33□□□□□ -1.245e-7■■□□□ 11.8
U2AF2P26368 UBE2E3-212ENST00000602888 499 ntTSL 22.45□□□□□ -2.025e-7■■□□□ 11.8
U2AF2P26368 TUG1-206ENST00000569149 968 ntTSL 37.31□□□□□ -1.242e-20■■□□□ 11.8
U2AF2P26368 TUG1-205ENST00000566220 1237 ntTSL 1 (best)6.51□□□□□ -1.372e-20■■□□□ 11.8
Retrieved 100 of 36,523 protein–RNA pairs in 353.9 ms