RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
C1GALT1-202ENST00000402468 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
C1GALT1-202ENST00000402468 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
C1GALT1-202ENST00000402468 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
C1GALT1-202ENST00000402468 FOXD1Q16676 465 aa15.44■□□□□ 0.06
C1GALT1-202ENST00000402468 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
C1GALT1-202ENST00000402468 MSH5O43196 834 aa14.54□□□□□ -0.08
C1GALT1-202ENST00000402468 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
C1GALT1-202ENST00000402468 PLPPR3Q6T4P5 718 aa14.34□□□□□ -0.11
C1GALT1-202ENST00000402468 PPP6R1Q9UPN7 881 aa14.25□□□□□ -0.13
C1GALT1-202ENST00000402468 ADRA2BP18089 450 aa14.19□□□□□ -0.14
C1GALT1-202ENST00000402468 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
C1GALT1-202ENST00000402468 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
C1GALT1-202ENST00000402468 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
C1GALT1-202ENST00000402468 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
C1GALT1-202ENST00000402468 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
C1GALT1-202ENST00000402468 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
C1GALT1-202ENST00000402468 KCNA4P22459 653 aa12.52□□□□□ -0.41
C1GALT1-202ENST00000402468 HOXD11P31277 338 aaPredicted RBP12.48□□□□□ -0.41
C1GALT1-202ENST00000402468 RNF39Q9H2S5 420 aa12.4□□□□□ -0.42
C1GALT1-202ENST00000402468 CNKSR2Q8WXI2 1034 aa12.37□□□□□ -0.43
C1GALT1-202ENST00000402468 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
C1GALT1-202ENST00000402468 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
C1GALT1-202ENST00000402468 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
C1GALT1-202ENST00000402468 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
C1GALT1-202ENST00000402468 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
C1GALT1-202ENST00000402468 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
C1GALT1-202ENST00000402468 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
C1GALT1-202ENST00000402468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.52e-7■□□□□ 9.2
C1GALT1-202ENST00000402468 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
C1GALT1-202ENST00000402468 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
C1GALT1-202ENST00000402468 SPINK5Q9NQ38 1064 aaPredicted RBP11.54□□□□□ -0.56
C1GALT1-202ENST00000402468 DSG3P32926 999 aa11.53□□□□□ -0.56
C1GALT1-202ENST00000402468 POTEHQ6S545 545 aa11.53□□□□□ -0.56
C1GALT1-202ENST00000402468 CAPN15O75808 1086 aa11.52□□□□□ -0.57
C1GALT1-202ENST00000402468 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
C1GALT1-202ENST00000402468 ZBTB22O15209 634 aa11.47□□□□□ -0.57
C1GALT1-202ENST00000402468 SLC4A2P04920 1241 aa11.36□□□□□ -0.59
C1GALT1-202ENST00000402468 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
C1GALT1-202ENST00000402468 ABCB7O75027 752 aa11.24□□□□□ -0.61
C1GALT1-202ENST00000402468 APLP2Q06481 763 aa11.24□□□□□ -0.61
C1GALT1-202ENST00000402468 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
C1GALT1-202ENST00000402468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.18□□□□□ -0.62
C1GALT1-202ENST00000402468 HNRNPUL2Q1KMD3 747 aaKnown RBP11.18□□□□□ -0.62
C1GALT1-202ENST00000402468 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
C1GALT1-202ENST00000402468 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
C1GALT1-202ENST00000402468 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
C1GALT1-202ENST00000402468 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
C1GALT1-202ENST00000402468 POLA2Q14181 598 aa10.91□□□□□ -0.66
C1GALT1-202ENST00000402468 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
C1GALT1-202ENST00000402468 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
C1GALT1-202ENST00000402468 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
C1GALT1-202ENST00000402468 FKBP8Q14318 412 aa10.67□□□□□ -0.7
C1GALT1-202ENST00000402468 ZBTB12Q9Y330 459 aaPredicted RBP10.65□□□□□ -0.7
C1GALT1-202ENST00000402468 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
C1GALT1-202ENST00000402468 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
C1GALT1-202ENST00000402468 OSCARQ8IYS5 282 aa10.58□□□□□ -0.72
C1GALT1-202ENST00000402468 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
C1GALT1-202ENST00000402468 PITPNM1O00562 1244 aa10.48□□□□□ -0.73
C1GALT1-202ENST00000402468 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.73
C1GALT1-202ENST00000402468 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
C1GALT1-202ENST00000402468 HAX1O00165 279 aa10.42□□□□□ -0.74
C1GALT1-202ENST00000402468 FBLN2P98095 1184 aa10.41□□□□□ -0.74
C1GALT1-202ENST00000402468 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
C1GALT1-202ENST00000402468 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
C1GALT1-202ENST00000402468 SPDYE2Q495Y8 402 aa10.32□□□□□ -0.76
C1GALT1-202ENST00000402468 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
C1GALT1-202ENST00000402468 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
C1GALT1-202ENST00000402468 EVX2Q03828 476 aa10.29□□□□□ -0.76
C1GALT1-202ENST00000402468 FBXO3Q9UK99 471 aa10.29□□□□□ -0.76
C1GALT1-202ENST00000402468 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
C1GALT1-202ENST00000402468 PRKAR2AP13861 404 aaKnown RBP10.21□□□□□ -0.77
C1GALT1-202ENST00000402468 CLEC11AQ9Y240 323 aa10.2□□□□□ -0.78
C1GALT1-202ENST00000402468 SPDYE1Q8NFV5 336 aaPredicted RBP10.19□□□□□ -0.78
C1GALT1-202ENST00000402468 SSUH2Q9Y2M2 353 aa10.16□□□□□ -0.78
C1GALT1-202ENST00000402468 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
C1GALT1-202ENST00000402468 PROM2Q8N271 834 aa10.14□□□□□ -0.79
C1GALT1-202ENST00000402468 C19orf67A6NJJ6 358 aa10.12□□□□□ -0.79
C1GALT1-202ENST00000402468 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
C1GALT1-202ENST00000402468 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
C1GALT1-202ENST00000402468 GABBR2O75899 941 aa10.03□□□□□ -0.8
C1GALT1-202ENST00000402468 SLC24A1O60721 1099 aa10.02□□□□□ -0.81
C1GALT1-202ENST00000402468 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
C1GALT1-202ENST00000402468 PABPN1Q86U42 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
C1GALT1-202ENST00000402468 LHX8Q68G74 356 aa9.92□□□□□ -0.82
C1GALT1-202ENST00000402468 STAG3Q9UJ98 1225 aa9.92□□□□□ -0.82
C1GALT1-202ENST00000402468 IFNLR1Q8IU57 520 aaPredicted RBP9.89□□□□□ -0.83
C1GALT1-202ENST00000402468 PLSCR2Q9NRY7 297 aa9.88□□□□□ -0.83
C1GALT1-202ENST00000402468 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
C1GALT1-202ENST00000402468 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
C1GALT1-202ENST00000402468 KLHL34Q8N239 644 aa9.85□□□□□ -0.83
C1GALT1-202ENST00000402468 PLCD3Q8N3E9 789 aa9.83□□□□□ -0.84
C1GALT1-202ENST00000402468 PLEKHG5O94827 1062 aa9.82□□□□□ -0.84
C1GALT1-202ENST00000402468 POTEIP0CG38 1075 aa9.82□□□□□ -0.84
C1GALT1-202ENST00000402468 SPOCK2Q92563 424 aa9.79□□□□□ -0.84
C1GALT1-202ENST00000402468 CLCN6P51797 869 aa9.77□□□□□ -0.85
C1GALT1-202ENST00000402468 DCAF8L2P0C7V8 631 aa9.76□□□□□ -0.85
C1GALT1-202ENST00000402468 MIER1Q8N108 512 aa9.76□□□□□ -0.85
C1GALT1-202ENST00000402468 ZBTB47Q9UFB7 747 aaPredicted RBP9.76□□□□□ -0.85
C1GALT1-202ENST00000402468 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms