Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.2□□□□□ -0.62
CD28P10747 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CD28P10747 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 AC005089.1-201ENST00000619486 2241 ntBASIC11.2□□□□□ -0.62
CD28P10747 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CD28P10747 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 HLA-DQB1-202ENST00000399079 1501 ntBASIC11.19□□□□□ -0.62
CD28P10747 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.19□□□□□ -0.62
CD28P10747 AC073869.2-201ENST00000417338 1026 ntBASIC11.19□□□□□ -0.62
CD28P10747 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC11.19□□□□□ -0.62
CD28P10747 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC11.19□□□□□ -0.62
CD28P10747 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC11.19□□□□□ -0.62
CD28P10747 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC11.19□□□□□ -0.62
CD28P10747 KRT8P1-201ENST00000557533 1207 ntBASIC11.19□□□□□ -0.62
CD28P10747 AC140658.4-201ENST00000561990 352 ntBASIC11.19□□□□□ -0.62
CD28P10747 RPL17P45-201ENST00000586289 509 ntBASIC11.19□□□□□ -0.62
CD28P10747 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 AC009560.1-201ENST00000620208 434 ntBASIC11.19□□□□□ -0.62
CD28P10747 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 STRCP1-201ENST00000509801 5328 ntBASIC11.19□□□□□ -0.62
CD28P10747 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.19□□□□□ -0.62
CD28P10747 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.19□□□□□ -0.62
CD28P10747 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CD28P10747 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms