Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM1P09493 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.82■□□□□ 0.12
TPM1P09493 AC135782.3-201ENST00000562782 2105 ntBASIC15.82■□□□□ 0.12
TPM1P09493 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TPM1P09493 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TPM1P09493 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM1P09493 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 RN7SKP175-201ENST00000408472 289 ntBASIC15.81■□□□□ 0.12
TPM1P09493 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.81■□□□□ 0.12
TPM1P09493 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 AL035414.1-201ENST00000451327 857 ntBASIC15.81■□□□□ 0.12
TPM1P09493 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM1P09493 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM1P09493 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
TPM1P09493 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM1P09493 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.81■□□□□ 0.12
TPM1P09493 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.81■□□□□ 0.12
TPM1P09493 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM1P09493 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.81■□□□□ 0.12
TPM1P09493 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TPM1P09493 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TPM1P09493 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TPM1P09493 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 AC010336.1-201ENST00000539278 4739 ntBASIC15.81■□□□□ 0.12
TPM1P09493 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM1P09493 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM1P09493 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM1P09493 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC15.8■□□□□ 0.12
TPM1P09493 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 AL118506.1-201ENST00000601296 3082 ntBASIC15.8■□□□□ 0.12
TPM1P09493 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 AC024075.2-201ENST00000598112 1473 ntBASIC15.8■□□□□ 0.12
TPM1P09493 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TPM1P09493 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.8■□□□□ 0.12
TPM1P09493 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 AC011495.1-201ENST00000498085 584 ntBASIC15.8■□□□□ 0.12
TPM1P09493 AL391280.1-201ENST00000506969 1062 ntBASIC15.8■□□□□ 0.12
TPM1P09493 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.8■□□□□ 0.12
TPM1P09493 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 AC145423.3-201ENST00000615987 467 ntBASIC15.8■□□□□ 0.12
TPM1P09493 AC002472.3-201ENST00000640124 621 ntBASIC15.8■□□□□ 0.12
TPM1P09493 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms