Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLDN5O00501 AL512430.1-201ENST00000392575 860 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 AC006987.1-201ENST00000413610 527 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.99□□□□□ -0.01
CLDN5O00501 AL592076.1-201ENST00000424448 303 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.99□□□□□ -0.01
CLDN5O00501 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.99□□□□□ -0.01
CLDN5O00501 CHCHD2P2-201ENST00000503744 321 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.99□□□□□ -0.01
CLDN5O00501 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 RN7SL455P-201ENST00000580629 282 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 AC103810.10-201ENST00000606504 343 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 BAP1-211ENST00000615113 489 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 AC103691.2-201ENST00000618824 433 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 AC051619.9-201ENST00000623237 597 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 AL353726.2-201ENST00000623259 884 ntBASIC14.99□□□□□ -0.01
CLDN5O00501 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
CLDN5O00501 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLDN5O00501 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLDN5O00501 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLDN5O00501 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN5O00501 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN5O00501 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN5O00501 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 AL590824.1-201ENST00000403828 1349 ntBASIC14.98□□□□□ -0.01
CLDN5O00501 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN5O00501 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 RPL13AP3-202ENST00000494676 1473 ntBASIC14.98□□□□□ -0.01
CLDN5O00501 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLDN5O00501 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 AP000356.3-201ENST00000382243 753 ntBASIC14.98□□□□□ -0.01
CLDN5O00501 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN5O00501 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN5O00501 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN5O00501 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN5O00501 AC138894.2-201ENST00000602838 371 ntBASIC14.98□□□□□ -0.01
CLDN5O00501 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN5O00501 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN5O00501 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN5O00501 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN5O00501 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms