Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 RN7SL574P-201ENST00000581512 297 ntBASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 AC020922.3-201ENST00000595064 547 ntBASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 AL109837.1-201ENST00000603272 613 ntBASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 AF254983.2-201ENST00000612331 135 ntBASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 CU633904.3-201ENST00000624042 1029 ntBASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGC4Q9Y5F7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
PCDHGC4Q9Y5F7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 AC103592.1-201ENST00000394513 664 ntBASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 HMGA1P1-201ENST00000415560 1062 ntBASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 OR8T1P-201ENST00000421347 918 ntBASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 AL133466.1-201ENST00000447582 150 ntBASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 AL021578.1-201ENST00000613646 709 ntBASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGC4Q9Y5F7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGC4Q9Y5F7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms