Protein–RNA interactions for Protein: Q9C099

LRRCC1, Leucine-rich repeat and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1Q9C099 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 AL008707.1-201ENST00000422498 534 ntBASIC17.56■□□□□ 0.4
LRRCC1Q9C099 FNTAP2-201ENST00000430308 634 ntBASIC17.56■□□□□ 0.4
LRRCC1Q9C099 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 GOLGA2P8-201ENST00000505201 779 ntBASIC17.56■□□□□ 0.4
LRRCC1Q9C099 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRCC1Q9C099 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 AL596276.2-201ENST00000447525 331 ntBASIC17.55■□□□□ 0.4
LRRCC1Q9C099 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 HIST2H2BC-201ENST00000498492 580 ntBASIC17.55■□□□□ 0.4
LRRCC1Q9C099 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 MIR4525-201ENST00000580000 75 ntBASIC17.55■□□□□ 0.4
LRRCC1Q9C099 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 FAM90A12P-201ENST00000519497 2375 ntBASIC17.55■□□□□ 0.4
LRRCC1Q9C099 FAM90A24P-201ENST00000520792 2369 ntBASIC17.55■□□□□ 0.4
LRRCC1Q9C099 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 AC015909.3-201ENST00000572855 1794 ntBASIC17.55■□□□□ 0.4
LRRCC1Q9C099 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRCC1Q9C099 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 FRMPD2B-201ENST00000431305 1347 ntBASIC17.54■□□□□ 0.4
LRRCC1Q9C099 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 ACTG1P2-201ENST00000415776 1125 ntBASIC17.54■□□□□ 0.4
LRRCC1Q9C099 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 OR8T1P-201ENST00000421347 918 ntBASIC17.54■□□□□ 0.4
LRRCC1Q9C099 ACTG1P11-201ENST00000425411 1125 ntBASIC17.54■□□□□ 0.4
LRRCC1Q9C099 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRCC1Q9C099 DUX4L50-201ENST00000455245 715 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms