Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.04□□□□□ -0.32
USB1Q9BQ65 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
USB1Q9BQ65 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.04□□□□□ -0.32
USB1Q9BQ65 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.04□□□□□ -0.32
USB1Q9BQ65 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.04□□□□□ -0.32
USB1Q9BQ65 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
USB1Q9BQ65 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
USB1Q9BQ65 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
USB1Q9BQ65 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.04□□□□□ -0.32
USB1Q9BQ65 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
USB1Q9BQ65 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
USB1Q9BQ65 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
USB1Q9BQ65 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
USB1Q9BQ65 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 SHC1P1-201ENST00000425230 1745 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 AOC4P-203ENST00000566825 2289 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 BTBD7P2-201ENST00000441962 620 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 AC021723.1-201ENST00000486306 515 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 AC106794.1-201ENST00000506935 792 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 DUX4L46-201ENST00000566845 751 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 AC090330.1-201ENST00000588646 764 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 AC244093.1-201ENST00000610837 814 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 AP001972.5-201ENST00000624624 2338 ntBASIC13.03□□□□□ -0.32
USB1Q9BQ65 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
USB1Q9BQ65 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.03□□□□□ -0.32
USB1Q9BQ65 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
USB1Q9BQ65 PPT1-213ENST00000641319 2388 ntBASIC13.02□□□□□ -0.32
USB1Q9BQ65 SALL4P5-201ENST00000419001 1760 ntBASIC13.02□□□□□ -0.32
USB1Q9BQ65 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.02□□□□□ -0.32
USB1Q9BQ65 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USB1Q9BQ65 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USB1Q9BQ65 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.02□□□□□ -0.32
USB1Q9BQ65 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USB1Q9BQ65 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USB1Q9BQ65 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USB1Q9BQ65 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
USB1Q9BQ65 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC012441.2-201ENST00000444843 739 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms