Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 LINC00554-201ENST00000564841 3011 ntBASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 AC007622.1-201ENST00000488371 535 ntBASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 AL033381.2-201ENST00000603854 732 ntBASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 CROT-203ENST00000419147 2959 ntTSL 2 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL22A1Q8NFW1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AL356653.1-201ENST00000402743 360 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 SNORD23-201ENST00000408876 110 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AP000346.2-202ENST00000425948 383 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 RN7SL2-201ENST00000490232 300 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 DIS3L2P1-201ENST00000509197 559 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 PMM2-216ENST00000569958 698 ntTSL 2 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 RN7SL4P-201ENST00000584058 295 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AC040160.2-201ENST00000623816 1675 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 GSTM2P1-201ENST00000405166 654 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AC239600.1-201ENST00000603201 462 ntBASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC18.16■□□□□ 0.5
COL22A1Q8NFW1 AL157832.2-205ENST00000597245 1649 ntBASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 SOD1-202ENST00000389995 865 ntTSL 3 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 NAA10-205ENST00000393712 908 ntTSL 5 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 GAPDHP29-201ENST00000429913 985 ntBASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 AC112694.1-202ENST00000540985 943 ntBASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms