Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
NUP43Q8NFH3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
NUP43Q8NFH3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.27
NUP43Q8NFH3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
NUP43Q8NFH3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 POM121L10P-201ENST00000436994 1285 ntBASIC13.39□□□□□ -0.27
NUP43Q8NFH3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 AC104982.3-201ENST00000581995 514 ntBASIC13.39□□□□□ -0.27
NUP43Q8NFH3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.39□□□□□ -0.27
NUP43Q8NFH3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 AL590824.1-201ENST00000403828 1349 ntBASIC13.39□□□□□ -0.27
NUP43Q8NFH3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NUP43Q8NFH3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 AC092580.1-201ENST00000433998 658 ntBASIC13.38□□□□□ -0.27
NUP43Q8NFH3 AL591846.1-201ENST00000451736 433 ntBASIC13.38□□□□□ -0.27
NUP43Q8NFH3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 AC022748.3-201ENST00000621828 275 ntBASIC13.38□□□□□ -0.27
NUP43Q8NFH3 AC004923.1-202ENST00000642106 209 ntBASIC13.38□□□□□ -0.27
NUP43Q8NFH3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms