Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLDN20P56880 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN20P56880 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLDN20P56880 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLDN20P56880 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN20P56880 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
CLDN20P56880 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLDN20P56880 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 VDAC1P1-201ENST00000439229 848 ntBASIC13.16□□□□□ -0.3
CLDN20P56880 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN20P56880 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN20P56880 AC106794.1-201ENST00000506935 792 ntBASIC13.16□□□□□ -0.3
CLDN20P56880 SCARNA21-201ENST00000517026 139 ntBASIC13.16□□□□□ -0.3
CLDN20P56880 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN20P56880 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN20P56880 AC020914.3-201ENST00000594712 304 ntBASIC13.16□□□□□ -0.3
CLDN20P56880 AC090164.2-201ENST00000611487 516 ntBASIC13.16□□□□□ -0.3
CLDN20P56880 AC244452.3-201ENST00000636814 210 ntBASIC13.16□□□□□ -0.3
CLDN20P56880 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLDN20P56880 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLDN20P56880 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLDN20P56880 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 AC144522.1-201ENST00000625111 1658 ntBASIC13.15□□□□□ -0.3
CLDN20P56880 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDN20P56880 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDN20P56880 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDN20P56880 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDN20P56880 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CLDN20P56880 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLDN20P56880 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDN20P56880 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLDN20P56880 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDN20P56880 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDN20P56880 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 RBM8B-201ENST00000555532 525 ntBASIC13.15□□□□□ -0.3
CLDN20P56880 AC013355.1-201ENST00000562625 723 ntBASIC13.15□□□□□ -0.3
CLDN20P56880 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.15□□□□□ -0.3
CLDN20P56880 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms