Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CLDN6P56747 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN6P56747 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CLDN6P56747 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN6P56747 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLDN6P56747 PTGER4P2-201ENST00000328411 252 ntBASIC13.66□□□□□ -0.22
CLDN6P56747 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN6P56747 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 AL135901.1-201ENST00000451812 333 ntBASIC13.66□□□□□ -0.22
CLDN6P56747 PTGER4P3-201ENST00000458150 252 ntBASIC13.66□□□□□ -0.22
CLDN6P56747 RN7SL23P-201ENST00000484055 275 ntBASIC13.66□□□□□ -0.22
CLDN6P56747 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDN6P56747 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDN6P56747 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN6P56747 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN6P56747 AC021016.3-201ENST00000608367 477 ntBASIC13.66□□□□□ -0.22
CLDN6P56747 AC090386.2-201ENST00000623010 1039 ntBASIC13.66□□□□□ -0.22
CLDN6P56747 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CLDN6P56747 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN6P56747 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN6P56747 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDN6P56747 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN6P56747 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLDN6P56747 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLDN6P56747 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLDN6P56747 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN6P56747 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN6P56747 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN6P56747 CHCHD2P2-201ENST00000503744 321 ntBASIC13.65□□□□□ -0.22
CLDN6P56747 AC106047.2-201ENST00000511723 743 ntBASIC13.65□□□□□ -0.22
CLDN6P56747 GDNF-207ENST00000515058 764 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms